| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dvul_1422 |
|---|
| Symbol | |
|---|
| ID | 4664531 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio vulgaris DP4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008751 |
|---|
| Strand | - |
|---|
| Start bp | 1723081 |
|---|
| End bp | 1723548 |
|---|
| Gene Length | 468 bp |
|---|
| Protein Length | 155 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 639819654 |
|---|
| Product | 3-dehydroquinate dehydratase |
|---|
| Protein accession | YP_966867 |
|---|
| Protein GI | 120602467 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0757] 3-dehydroquinate dehydratase II |
|---|
| TIGRFAM ID | [TIGR01088] 3-dehydroquinate dehydratase, type II |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.216842 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCAAGTT ATAGGCTGCT CATCATGAAC GGCCCCAATC TCGGTGCGCT TGGTGAACGC
CAGCCCGAGA TATACGGAAC GACAGGCATG GATGCCGTGC CTGCCCTTGT GAAGAGCCTT
CTTGGCGACG CCGCATCCGA CATCGAACTG ACGTTCTTCC AGTCGAACCA TGAGGGAGCG
CTCATCGACC GTCTTGAGCA GGCACGCCGC GACGGGGTGG ATGGTGTCAT CCTCAACGCG
GGTGCGTTCA CGCACACCAG CCTTGCCTTG GCAGACTGCC TTGCGTGGAT TGGCATCCCG
TGTGTCGAGG TCCACCTCAG CAATGTCATG GCGCGGCAAG AGCCCATGCG TCACAAGAGC
CTCATCGGCA GACACGTTAT CGGCATTATC GCGGGTTTTG GCATCATGGG CTACGCCCTC
GCCGTACAGG CGATGGTGCA GCATTCGAGA AAGAGCGGCG ACGCCTAG
|
|---|
| Protein sequence | MPSYRLLIMN GPNLGALGER QPEIYGTTGM DAVPALVKSL LGDAASDIEL TFFQSNHEGA
LIDRLEQARR DGVDGVILNA GAFTHTSLAL ADCLAWIGIP CVEVHLSNVM ARQEPMRHKS
LIGRHVIGII AGFGIMGYAL AVQAMVQHSR KSGDA
|
|---|
| |