| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dvul_1418 |
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| Symbol | |
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| ID | 4664490 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio vulgaris DP4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008751 |
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| Strand | + |
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| Start bp | 1718270 |
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| End bp | 1719148 |
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| Gene Length | 879 bp |
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| Protein Length | 292 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 639819650 |
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| Product | pseudouridine synthase |
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| Protein accession | YP_966863 |
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| Protein GI | 120602463 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
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| TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.126081 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAGCATG ATTCCCCCCG TCAAGGTGAT TCCCGGAGCA CCCGACAGCA CACGTCTCCC
CGCAAGCGGG CTGCCGTGCC CCACGTCCCT GCCCCGCAAG CGGGCACTTC CCCCGACGAA
GTGGAGGATG GCGGGACGAG GCTTAACAAG GCCCTCTCCG GGGCTGGTGT CTGCTCGCGC
AGGCAGGCTG ACACCTTCAT CGCGGGCGGG AAAGTGCGCG TGAACGGCGA GGTGGTCACG
GAGATGGGCC GCCGTGTTTT CCCCGCCACA GACCGTATCG AGGTCGAAGG ACGTCTGCTG
GCTTGCGGCG AAGCGCTGAA CCGGCATCGC CATACCTATG TGATGCTCAA CAAGCCCGTT
CAGGTCGTCT CCACCGTGCG CGACCCGCAG GGGCGGACAA CCATCCTCGA CATCCTCCCC
GACGACCTGA AGACCGTACG ACTCTATCCT GTGGGGCGGC TCGACTTCTT CTCGGAAGGG
TTGCTTCTGC TCACGGACGA CGGAGACCTC ACGCATCGCC TGACCCATCC CAAATGGCAT
CTTCCCAAAT ATTACAGGGT GCTGGTTCGT GAAGACATCC CACCCGCAGC GTTGACCGCC
ATGCGTTCCG GGATGACTCT TGCCGAGGGC GACCGCGTGG CGCCTGTAGA GGCATACATC
ATCGACCGGT CGGAGTATGG GGTGGAACTT GAAATGGTGC TCCATCAGGG AATCAACCGG
CAGATTCGCC GCATGTGCCG CGACCTCGGG CTTACCGTGC TTCGCCTTTT GCGCATCCAG
CAAGGTCCCG TAGAACTCGG CAACCTGTCT CGTGGTTCGT GTCGCCGACT GGAAGACCAT
GAGGTGAAGG CGCTTCGCAA GGCCGCCGGA CTCTCCTGA
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| Protein sequence | MKHDSPRQGD SRSTRQHTSP RKRAAVPHVP APQAGTSPDE VEDGGTRLNK ALSGAGVCSR
RQADTFIAGG KVRVNGEVVT EMGRRVFPAT DRIEVEGRLL ACGEALNRHR HTYVMLNKPV
QVVSTVRDPQ GRTTILDILP DDLKTVRLYP VGRLDFFSEG LLLLTDDGDL THRLTHPKWH
LPKYYRVLVR EDIPPAALTA MRSGMTLAEG DRVAPVEAYI IDRSEYGVEL EMVLHQGINR
QIRRMCRDLG LTVLRLLRIQ QGPVELGNLS RGSCRRLEDH EVKALRKAAG LS
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