Gene Dvul_1389 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvul_1389 
Symbol 
ID4664898 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris DP4 
KingdomBacteria 
Replicon accessionNC_008751 
Strand
Start bp1690278 
End bp1691690 
Gene Length1413 bp 
Protein Length470 aa 
Translation table11 
GC content63% 
IMG OID639819619 
Productaspartate ammonia-lyase 
Protein accessionYP_966834 
Protein GI120602434 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1027] Aspartate ammonia-lyase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0123141 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTTTGT CTGATCGGGA CGACATACGC ATAGAGCACG ACCTGCTCGG CGACTGTGCG 
GTTCCCCGCA CGGCCTTGCA CGGTGCGCAT ACGCAACGGG CGCTCTCCAA TGTCGCCCTC
AGCGGTCGCC CGTTGCACCC GGGAATCATC AGGGCATTCG GGGCCGTAAA GCGTGCCTGT
GCACGTACCA ACATGAACCT CGGCCACCTC TCCCGTGAGG TGGCCGAGGC CATCATCATG
GCATGTGATG AGCTTGAAGA TGGAGAATTG TGCAGGCACA TCGTGGTCGA CGCACTGCAA
GGCGGCGCGG GAACATCCGC CAACATGAAC GTCAACGAAG TGCTGGCGAA CCGCGCCGAA
GAAATGTTGG GGGGCACGCG AGGCCAGTAC CAGTTTGTCG ACCCGCTGGC GCACGTCAAT
CTGCATCAGT CCACCAACGA TGTGTTCCCC ACGGCAGTGC GGATTGCGGC ATTGCGTCTG
CTGGCGCGAC TCGAACCGGC GATAGCCGCG CTACAGGCCG CTTTCCAGAC GCACGAGGCG
TCGTTCGCGC AGGTGGTGCG GCTAGGGCGC ACCCAGTTGC AGGATGCCGT GCCCATGACA
TTCGGGGCAG CCTGTGGCGC GTGGGCCGAA GCCCTTTCGC GGGACAGGTG GCGCGTCTTC
AAGTGTTCGG AGAGACTGCG CGTCGTCAAT CTGGGTGGAA CCGCCATCGG CACCGGCATC
GCAGCCCCCC GAAGCTACAT CCTCTCTGTC GTGGACAGAT TGCGCGAAGA CACGTGTCTG
CCTCTGGCGC GCGCCGAAAA CCTCATGGAC GCCACCCAGA ACGTCGATGC GTTCGTCGAG
GTGTCAGGCA TACTCAAGGC CCACGCCTCG AATCTGCTCA AGCTTTCCTC CGACCTGCGC
CTGCTGGCGT CGGGGCCGGG TGGCGGCATC GGCGAGGTCG TACTCCCGCC CGTCCAGGCC
GGGTCGAGCA TCATGCCCGG CAAGGTCAAC CCGGTCGTAT GCGAGACCGT GGCACAGGCG
GCCATGCAGG CAACGGCCAA CGACCTTGCC ATCACGCTAT CCGCCCAGCA CGGTCAGTTT
GAACTGAATG CCTTCATGCC GCTCATCGCG GATGCCCTGC TGCATGGCAT CGAGCTTCTC
ACGAATGCCT GCGACCTGTT CCGTACGCGC TGTGTCGAGG GGTTACACCC TGATACGGAA
ACCTGTGCCC GGCACGTTTC CACATCGACA GCCACGCTTA CGGCACTCGT TCCCGAAATC
GGCTACGCCG CCGCCTCTGA AATGGCCCGC CACATGCGCG AACACGGCAC GGACGTCTTC
GGGGCTGCCA AGGCGACAGG ACTCATCGAC GAAGACCGGC TTGCAGGGCT GCTTTCTCCT
GAGCGTCTTA CGGTACTGGG GTACAAGGGA TGA
 
Protein sequence
MSLSDRDDIR IEHDLLGDCA VPRTALHGAH TQRALSNVAL SGRPLHPGII RAFGAVKRAC 
ARTNMNLGHL SREVAEAIIM ACDELEDGEL CRHIVVDALQ GGAGTSANMN VNEVLANRAE
EMLGGTRGQY QFVDPLAHVN LHQSTNDVFP TAVRIAALRL LARLEPAIAA LQAAFQTHEA
SFAQVVRLGR TQLQDAVPMT FGAACGAWAE ALSRDRWRVF KCSERLRVVN LGGTAIGTGI
AAPRSYILSV VDRLREDTCL PLARAENLMD ATQNVDAFVE VSGILKAHAS NLLKLSSDLR
LLASGPGGGI GEVVLPPVQA GSSIMPGKVN PVVCETVAQA AMQATANDLA ITLSAQHGQF
ELNAFMPLIA DALLHGIELL TNACDLFRTR CVEGLHPDTE TCARHVSTST ATLTALVPEI
GYAAASEMAR HMREHGTDVF GAAKATGLID EDRLAGLLSP ERLTVLGYKG