Gene Dvul_1275 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvul_1275 
Symbol 
ID4663574 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris DP4 
KingdomBacteria 
Replicon accessionNC_008751 
Strand
Start bp1558104 
End bp1558742 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content62% 
IMG OID639819506 
Productphosphoheptose isomerase 
Protein accessionYP_966721 
Protein GI120602321 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0279] Phosphoheptose isomerase 
TIGRFAM ID[TIGR00441] phosphoheptose isomerase 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGGGAT ACATGACCGA AGAAGCACGC CGCATCGTCA TCGAACACGC CGTGGAAGGC 
ACTCGCCTGC GCGAGTCCTA TTTCAATGGC AATGCCGACA AGGTGGTCGA CGGTGCGCGA
CGTATGGCCG TGACACTGGC AAAGGGCCAC AAACTGCTCT TCTGCGGCAA CGGCGGCAGC
GCGGCAGACG CGCAGCATCT CGCTGCAGAA TTCGTCAACC GCTTCCAGAT GGAACGCCCT
CCCCTGCCTG CCATCGCCCT GACCACCGAC ACCTCCATCA TCACGGCCAT CGGCAACGAC
TACAGCTTCG ACCAGATTTT CGAGAAGCAG GTGCAGGCAC TCGGCAACGA AGGCGACATG
CTCGTGGGCA TTTCGACTTC GGGCAACAGC CCCAACGTGG TTCGCGCCAT GCGTGCCGCC
CGTGAACGCG GCCTTGCGAC CATGGGCCTC ACCGGTCGCG GCGGTGGCGA GATGGCGGGG
CTGTGCGACA TCCTCTTCGA TGTCGACCAC GGTCGCACCG CCCTCGTTCA GGAGGTGCAC
ATCACCATTG GGCACCTTCT CTGCGGCCTC ACCGATCATT TTCTCTTCGA GAACGTACTC
GCCCTCCAGC CGTGGCTGAA GGACGCGACC AACGCATAG
 
Protein sequence
MEGYMTEEAR RIVIEHAVEG TRLRESYFNG NADKVVDGAR RMAVTLAKGH KLLFCGNGGS 
AADAQHLAAE FVNRFQMERP PLPAIALTTD TSIITAIGND YSFDQIFEKQ VQALGNEGDM
LVGISTSGNS PNVVRAMRAA RERGLATMGL TGRGGGEMAG LCDILFDVDH GRTALVQEVH
ITIGHLLCGL TDHFLFENVL ALQPWLKDAT NA