Gene Dvul_1223 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvul_1223 
Symbol 
ID4662235 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris DP4 
KingdomBacteria 
Replicon accessionNC_008751 
Strand
Start bp1501136 
End bp1502284 
Gene Length1149 bp 
Protein Length382 aa 
Translation table11 
GC content63% 
IMG OID639819455 
Product2-oxoglutarate ferredoxin oxidoreductase subunit alpha 
Protein accessionYP_966670 
Protein GI120602270 
COG category[C] Energy production and conversion 
COG ID[COG0674] Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.393324 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.982522 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCCTGC AACTGAAACG ACGCAAAAGA CGCGAGTTGT TCGCCCTCGG AAACGAGGCT 
GTGGCCGAAG GCGCCCTGCT GGCCGGGTGT ACGTTCTATG CCGGGTATCC CATCACCCCC
TCCACCGAAA TCATGGAAGT GATGGCTGCC CGCCTGCCCC GCATGGAAGA TGGCGTGTTC
ATCCAGATGG AGGACGAAAT CGCCAGTATG GGTGCCGCCA TCGGAGCCTC TCTTGCTGGC
CGCAAGGCCA TGACGGCCAC ATCCGGGCCG GGCTTCTCGC TCATGCAGGA GCACATCGGC
TATGCGTGCA TGGTCGAGGC ACCGCTGGTC ATCGTCAACG TCATGCGCGG CGGCCCCAGC
ACGGGCCTGC CCACCTGCCC TGCACAGGGC GACGTGCAGA TGGCACGGTG GGGTACGCAC
GGCGACCACC CCATCATCGT CCTTTCGGCA TCCAACGTGC AGGAATGCCT TGAGATGACG
GTGACGGCCT TCAACTACGC AGAGAAGTAC CGCACCCCTG TCATCCTGCT CATCGACGAG
GTCACGGCGC ACACCCGCGA GAAGATCATC GTCCCCCATG CCGAAGAACT CGAGATCATT
TCCCGGGTCG AGCCTACAGT GCCCCCGGAG TGGTTCAAGC CCTACGCCGA TACGGTGCGT
GGCGTGCCCG CCATGCCCGC CATCGGTTCC GGCTACAGGA TGCATGTCAC CGGACTGACC
CACGACGTGA TGGGCTATCC CACGCAGCGC CCCGATGAAG TGAAGGACAT GATGCTGCGC
CTCTTCCGCA AGATCGACCA GTTCTACGGC GACATACAGC TCACCGACAG CTTTGCCCTC
GAAGATGCCG AAGTGGCCGT CATCGCCTAC GGCAGCGTGG CCCGTTCTGC CCATCTCGCC
GTCGAACAGG CGCGGGAACG CGGCGCGAAA GCCGGTCTCC TCACACTGAA GACGCTCTTC
CCCTTCCCGC GCCCCGCCGT CGAGACGCTG GCCCGCCGGT GCTCCATCCT CGTCGTGCCG
GAGATGAACA TGGGGCAGAT GTCGCGTGAA GTGAAACGCG TCAACAACGG TCATGCGCGC
GTCCGCACCA TCAACAGGGT CGACGGACAG ATCATCACGC CTTCCGAAAT CCTCAAAATG
CTCCTGTAG
 
Protein sequence
MALQLKRRKR RELFALGNEA VAEGALLAGC TFYAGYPITP STEIMEVMAA RLPRMEDGVF 
IQMEDEIASM GAAIGASLAG RKAMTATSGP GFSLMQEHIG YACMVEAPLV IVNVMRGGPS
TGLPTCPAQG DVQMARWGTH GDHPIIVLSA SNVQECLEMT VTAFNYAEKY RTPVILLIDE
VTAHTREKII VPHAEELEII SRVEPTVPPE WFKPYADTVR GVPAMPAIGS GYRMHVTGLT
HDVMGYPTQR PDEVKDMMLR LFRKIDQFYG DIQLTDSFAL EDAEVAVIAY GSVARSAHLA
VEQARERGAK AGLLTLKTLF PFPRPAVETL ARRCSILVVP EMNMGQMSRE VKRVNNGHAR
VRTINRVDGQ IITPSEILKM LL