Gene Dvul_0859 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvul_0859 
Symbol 
ID4663863 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris DP4 
KingdomBacteria 
Replicon accessionNC_008751 
Strand
Start bp1059661 
End bp1060905 
Gene Length1245 bp 
Protein Length414 aa 
Translation table11 
GC content55% 
IMG OID639819081 
Productbeta-lactamase domain-containing protein 
Protein accessionYP_966307 
Protein GI120601907 
COG category[R] General function prediction only 
COG ID[COG0595] Predicted hydrolase of the metallo-beta-lactamase superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0698444 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.411442 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGATG TACGCATAAC CATTCATCGT GCGGCTTCAG AGATTGGTGG CAATTGCATT 
GAGATCACCA CCGAAGATGG GGCACGCCTT ATCCTTGATG TCGGAAGGCC CCTGGACGTG
CCCGAAAGTT TAGAGCCACA GCTCCCAGCG AGCCTTGATC TTTCGAAGCC CGTAGAGGGG
GTTCTACTAT CCCATCCACA TCAAGATCAC TATGGCCTTC TTCAACAACT GCCAACCTCT
TGGCCCGTCT TTTCTGGAGA CGCCGCAGCC AAGCTCATCA GGCTGACCTC TGAAATCATC
CACGAACCAA TCACCCGCTC GATCTCGACA TGGCTCAGCG GCAGCCCATT CCCGGCAGGG
CCGTTTCGAA TAACACCTCT GCTGACAGAC CATTCCGCGT TCGATGCATA CATGATTCAG
ATCGAAGTAG CTGGAAAGAA GATTCTCTAC TCAGGAGACT TTCGGACGCA TGGCCGCAAG
AAGGCACTGG TTGAACGCCT GATGGCGTCA CCTCCAGAGA ACCTTGACGC GCTCATCATG
GAGGGGACGA ACCTCGGGAG TGATAAGCCC TGCATCAGCG AATCCACCCT TGAGGAGCAG
TTTGTTGACC TCTTCCAGAA AACCGCTGGC AGGGTGTTCG TTGCTTGGTC CGCACAAAAT
CTTGACCGAA CAGTCTCGCT CTATCGCGCT TGCAAGAAGA CAGGCCGCAC GCTGGTGGTA
GATCTCTACA CAGCAGAAGT ACTCGAGATG CTGGGGGAGC ACGCAAAAAT CCCCCAACCT
GGATGGCCAA ACCTCAAGGT GGTTATCACC AGCAGACTGG CTGAGTTTTA TCGGCGGAAA
GGACGCGAGG ATGTGACGGA ACGCATGGTC GCGCATGGAA TTTCTGCCCA ACGGCTCGCG
GAGACGCCTG GACGATGGGT GGTCATGACC CGAGGGTCGC TGCTAGGCGA CTACGAGCGC
AAAGGCGTGG CCCCGAATGC AAGCGACGTG TGGGTGTGGT CCATGTGGCG CGGGTATCTT
GAAAAAACAC CGGGGCAAGG AGTTAAGGCT TGGTTTGATA GCTTCGGTGC GCCCTCTGCC
CATTTACACA CCAGTGGTCA TGCCTCGACT GCGGATCTTA AAGAATTCGC GCAGAAGATG
AACCCCAAAG TGCTGTTGCC CGTACACGGG ACAGCTTGGA CACTAGGCAT GGACGGCTTC
CCCAACATCG CCAAACTAGA GGATGGGCAC TTTGTCACGA TTTGA
 
Protein sequence
MSDVRITIHR AASEIGGNCI EITTEDGARL ILDVGRPLDV PESLEPQLPA SLDLSKPVEG 
VLLSHPHQDH YGLLQQLPTS WPVFSGDAAA KLIRLTSEII HEPITRSIST WLSGSPFPAG
PFRITPLLTD HSAFDAYMIQ IEVAGKKILY SGDFRTHGRK KALVERLMAS PPENLDALIM
EGTNLGSDKP CISESTLEEQ FVDLFQKTAG RVFVAWSAQN LDRTVSLYRA CKKTGRTLVV
DLYTAEVLEM LGEHAKIPQP GWPNLKVVIT SRLAEFYRRK GREDVTERMV AHGISAQRLA
ETPGRWVVMT RGSLLGDYER KGVAPNASDV WVWSMWRGYL EKTPGQGVKA WFDSFGAPSA
HLHTSGHAST ADLKEFAQKM NPKVLLPVHG TAWTLGMDGF PNIAKLEDGH FVTI