| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dvul_0836 |
|---|
| Symbol | |
|---|
| ID | 4664158 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio vulgaris DP4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008751 |
|---|
| Strand | + |
|---|
| Start bp | 1025229 |
|---|
| End bp | 1026638 |
|---|
| Gene Length | 1410 bp |
|---|
| Protein Length | 469 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 639819057 |
|---|
| Product | two component, sigma54 specific, Fis family transcriptional regulator |
|---|
| Protein accession | YP_966284 |
|---|
| Protein GI | 120601884 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 5 |
|---|
| Fosmid unclonability p-value | 0.0464248 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCGTACCA GTTATTCCGT GCTGGCAGTG GATGACGAAC CATCCATCGG CAAGTTGCTG
GAAAAGGAAC TGTCGACGCC AGCGCGCGCC GTGCATGTGG CCGGTAGTGC CCGGCAGGCG
CGTGAACGGT TGCGGCGCGC CACCTACGAG GTGGTGGTGC TGGACATCCG GCTGCCCGAC
GCCGACGGCA TCGAGTTCAT GGTGGAATTG CGCCAGCGCT ATCCCGACAT GGAGGTCATC
CTCATCACCG GGCACGGCAA CATCGACAAT GCTGTGGAAG CCATGAAACT GGGTGCCTAC
GACTACATCA CCAAGCCGTT CAACCTGACC GAGCTCGAAG TGGTGGTCGA GCGTGCCTAT
CAAAGGGCTT TTTTACGCAA TGAGAACAGA GCGTTGCGTC ATGCGCACGA CCGTGGGCGA
CCGGGTGTGA CGCTTATCGG CAACTCACAG GTGATCAAGG AGGTGCGCTA CCTCATCGAA
AAGGTGGCAC CGACCGATGT GCCTGTCCTC ATCACCGGTG AAAGCGGCGC AGGCAAAGAG
GTGGCGGCCC ATGCCATCCA GTCGCTGGGC ACTCGCGCAG ACAAGCCGTT CATCATCAAG
AACTGCGCCA CGTTGCAGAA GGAGTTGGCC CGTAGCGAAC TGTTCGGCCA TGTCCGCGGT
TCGTTCACAG GGGCGCTGGA AAGCCGCGAC GGACTCATGG CCTTCGCCAA CAAGGGAACG
CTGTTCCTCG ACGAGATAGG CGAATTGCCC ATGGAGGTGC AGGCTTCGCT GTTGCGGGTG
CTGGAGAACA AGACCTACCG CCGTGTGGGA GAGAAGGACC ATCGCAGCTG CGACCTCAGG
CTCATCTTCG CCACCAACCG CACCCTCGCC GGAGAGGTCG AGGCGGGGCG CTTTCACGAG
GCCCTGTACC ACCGCATCAA CGTATTCAAT ATCGAGATGC CCCCCCTGCG TGAGCGCAAG
GAGGACATTC CCCTGCTGGC GGAGTTCTTT CTCGCCCGCC TCGGCAACGG GCGCGACGAC
CTGCGCATAT CCGACAAGGC CATGTCGTGC CTGATGCAGT ACGCATGGCC CGGTAACGTG
CGTGAATTGC GTAACGTGCT TGAACGCAGC ATCATCCTCG CCGAGAACAA TCTCATCACC
GAACATGCGT TGCCGCGTGA CCTCGCGGGA TTTGCCGGTG GCAGCGTTGG GCAGTCCGGC
GTCACAGGTG CGTCCGGTGT TTGCGGTACG CCCGGCGCGC CCGGTGCAAT GGGCGAGATG
CAGGGGCCGT TGTCGCTGGA AGCCATGGAA CGTGAGCACA TCGCCCGTAT CCTCGAATTC
TATGACAACA ACCGTTCGCT GGCTGCCACG GCACTGGGCA TCAGCCGTAA GACGCTGTAC
CGCAAGATGC GGGAATACGA CATCGGCTAG
|
|---|
| Protein sequence | MRTSYSVLAV DDEPSIGKLL EKELSTPARA VHVAGSARQA RERLRRATYE VVVLDIRLPD
ADGIEFMVEL RQRYPDMEVI LITGHGNIDN AVEAMKLGAY DYITKPFNLT ELEVVVERAY
QRAFLRNENR ALRHAHDRGR PGVTLIGNSQ VIKEVRYLIE KVAPTDVPVL ITGESGAGKE
VAAHAIQSLG TRADKPFIIK NCATLQKELA RSELFGHVRG SFTGALESRD GLMAFANKGT
LFLDEIGELP MEVQASLLRV LENKTYRRVG EKDHRSCDLR LIFATNRTLA GEVEAGRFHE
ALYHRINVFN IEMPPLRERK EDIPLLAEFF LARLGNGRDD LRISDKAMSC LMQYAWPGNV
RELRNVLERS IILAENNLIT EHALPRDLAG FAGGSVGQSG VTGASGVCGT PGAPGAMGEM
QGPLSLEAME REHIARILEF YDNNRSLAAT ALGISRKTLY RKMREYDIG
|
|---|
| |