Gene Dvul_0797 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvul_0797 
Symbol 
ID4664101 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris DP4 
KingdomBacteria 
Replicon accessionNC_008751 
Strand
Start bp979937 
End bp981403 
Gene Length1467 bp 
Protein Length488 aa 
Translation table11 
GC content67% 
IMG OID639819018 
Producthypothetical protein 
Protein accessionYP_966245 
Protein GI120601845 
COG category[V] Defense mechanisms 
COG ID[COG0577] ABC-type antimicrobial peptide transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCGAG ACCCCTCGGC CACCGGTCCG GAGGACACCG TGTCGCGTTG CGCGACAGGG 
TGCCCGGAAG ACGGCACGGC GGGCGGCGCG GTGGAGCCCA TGGCCGGGGG CGTTTCCGCA
GGCATGGCCT CAGGCGGGGC CGGGCTCATG GAGGGGCATA CGCAAGGCCA CATGCAGGGG
CGTATGCCCG GACGTACGCT TGGACGCATG GCGGGGCATG TGGCTGCCTT CACGGGGCTG
TCGCCGCGCC TGCTGTGGCG TGCGCTTCGT ATGGCCTTCT TCGCACTCGG GGCCTATCGG
CTGCGTAGTC TGTTCGTGGT GGCGGCGGTG TCGCTGGGCA TCGCCTCGCT CACGGTCATC
GTGGCGGCGG TCGACGGCGC GAGCAAGAAG GCCGAAGAGA TAACCGACAT GTTCGGCCCC
GATGCCGTGC TGGTGTTCGG CGGTTCGACC ATCCACCGGG CGGTGGGGGA CAGGAACCTC
ACCCTGTCGT GGGATGACGC CCTCGCCCTG CGTTCGTCGT TGCCGGGGGC GTATCTTGTG
GTGCCCATGC GTGCCAAGAG CGCTGTGCGC CTCAAGAATG GAGACGCCAA TTACGATGTG
CCCATCGTGG TGGGTGCCAC AGAGAATTAC GCCGAGGCAT GGAACTGGCC TCTCGTCGAA
GGGCGCGACT TCACCGCCGA GGACGTCCGG CGCGGGGCGC GTGTCTGCCT CCTGGGTGAC
AAGCCCGCCC GCGAACTTTT CGGGGATGTG AGCCCCGTCG GGCGTTCGTT CCTCATGGCG
GGGGTTCCCA TGACGGTGGT GGGCCGTCTC GCCTACAGGG GCATGTCGGG CGGCGGCGGT
AGCGTCGACG ACCGCCTCAT CGTGCCCATC ACCACCCTTA CGCAGCGTTT CAACCTCGAC
CGTCGCTATT TCCGGGCCCT GCGCGTGAAG TTCACCGATG CGGAGAACAT CGACCGCCAC
GTGGCCGACC TCACGTCGCT GTTGCGCGAC CTGCATGGAC TCAAGGGGGA AGACCCGGAT
GACTTCACCG TGCTCACTGC CAGCGAGGTG CGTCGTTTCC TGTCCATGAT CAAGGGCGGG
CTGGTGCTCT TTCTGGGCAT CACGGCGGCA GCGGCCATGG CGGTGGGTGG CTTCGTGCTG
GCCAATCTAT TCTATCTCTC CGTCACGGAA CGCCGGGTCG AGATCGGTCT CAAGAAGGCG
TTGGGGGCAC CCTCCCGCGC CGTACTGGTG CAGTTCCTGT GCGAGGCCGT GGCCCTGACG
CTGCTAGGGG CCATCGTGGG CCTGCTGCTG GGCATGGCCA TGGGGCAGGC ACTGGAACGG
CTGGGATTCA TCGAGATGGT GCTTTCCGCC AAGGTCTTCG GCATCGCCGT GGTCGCCTCA
TCGGTCGTGG GAGTGGTCTT CGGCCTGCGT CCGGCCCGCG CCGCCGCGGC CCTCGACCCT
ATCGCCGCCT TGCGGGGAGG GGAGTAG
 
Protein sequence
MKRDPSATGP EDTVSRCATG CPEDGTAGGA VEPMAGGVSA GMASGGAGLM EGHTQGHMQG 
RMPGRTLGRM AGHVAAFTGL SPRLLWRALR MAFFALGAYR LRSLFVVAAV SLGIASLTVI
VAAVDGASKK AEEITDMFGP DAVLVFGGST IHRAVGDRNL TLSWDDALAL RSSLPGAYLV
VPMRAKSAVR LKNGDANYDV PIVVGATENY AEAWNWPLVE GRDFTAEDVR RGARVCLLGD
KPARELFGDV SPVGRSFLMA GVPMTVVGRL AYRGMSGGGG SVDDRLIVPI TTLTQRFNLD
RRYFRALRVK FTDAENIDRH VADLTSLLRD LHGLKGEDPD DFTVLTASEV RRFLSMIKGG
LVLFLGITAA AAMAVGGFVL ANLFYLSVTE RRVEIGLKKA LGAPSRAVLV QFLCEAVALT
LLGAIVGLLL GMAMGQALER LGFIEMVLSA KVFGIAVVAS SVVGVVFGLR PARAAAALDP
IAALRGGE