| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dvul_0712 |
|---|
| Symbol | pheT |
|---|
| ID | 4663053 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio vulgaris DP4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008751 |
|---|
| Strand | + |
|---|
| Start bp | 877232 |
|---|
| End bp | 879628 |
|---|
| Gene Length | 2397 bp |
|---|
| Protein Length | 798 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 639818930 |
|---|
| Product | phenylalanyl-tRNA synthetase subunit beta |
|---|
| Protein accession | YP_966162 |
|---|
| Protein GI | 120601762 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0072] Phenylalanyl-tRNA synthetase beta subunit |
|---|
| TIGRFAM ID | [TIGR00472] phenylalanyl-tRNA synthetase, beta subunit, non-spirochete bacterial |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.11193 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.589363 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTTCTGA GTCTCAAATG GCTGCGCGAA TTCGTACCCT TTGAAGGCAC CGCCGCCGAA
CTCGGCGACA GGCTGACCAT GCTCGGCCTC GAACTCGAAG AGATCATCCG CCCCTTCGAC
GCCATCGAGC CCATCGTCGT CGGCCATGTG GTCTCGCGTG AGCGGCATCC CGAGGCTGAC
AAGCTTTCGG TGTGCAAGGT CGACGTGGGG CAGGGCGAAC CTCTGGACAT CGTGTGCGGT
GCGCCCAACG TGGCTGCCGG TCAGCGTGTC CCGGTGGCCC TGGTGGGCAC CACCATGCCC
GGCGGCATGG TCATCAAGAA GGCCAAACTG CGGGGACAGC CCTCGCATGG CATGATCTGC
TCCGAGCGCG AACTTGGCCT CGGCGAAGAC CATGACGGCA TCATGGTGCT GCCCGAATCG
TTCCGCATCG GTGCCAGGCT GGTCGATGAA CTGGACCTCG ACCGTGAGGT CTGCGACATC
GCCATCACGC CCAACCGCGC CGACTGCCTC TCGGTTCTCG GCCTCGCCCG CGAAGTGGCA
CTGGCCTTCG GCCTGCCGCT CACCATGCCT GCCCTCGACC TGAAGGAAGA GGGGGCCGAT
GCGTCGAATG CGCTGCGTAT CGACATCCCC GACGCCTCGC TGTGCCCGCT GTTCCACGGG
CGCGTGCTCG AAGGGGCCGC CGTCCGCAAA AGCCCGTCGT GGATGCGCTA CCGGCTCATC
GCCGTGGGGG TGCGTCCCAT CTCCAACATC GTGGACGTGA CCAACTACAT CCTCATGGAA
CTCGGTCAGC CGCTGCACGC CTACGACCTC GACCTGCTTG CAGGAGGCCG CATCGAAGTC
TCCGCCGCCC GAGAGGGCGA GCGTCTGACG ACCCTCGACG GTGTCGAACG CGTGCTGACA
TCCAACGACC TGCTCATCCG CGACGGCGAG AAGCCCGTGG GCCTTGCCGG GGTCATGGGC
GGTGCCGAGA CGGAGATATC CGACAAGAGC AGCCGGGTGT TCCTCGAAGC CGCGGTCTTC
CGCCCCGGCA CCATCCGCAA GACGGCCCGT CGCCTCGGCC TCTCAAGCGA AGCCTCGTAC
CGTTTCGAAC GCGGGGTCGA CCAGGTGGTG TGCACCTACG CCATGAACCG CGCTGCGCAA
CTCATCGCAG GCCTTTCCGG GGCGACGCTT CGTCCCGGCA TCTGCCACAA TGAGCCGCTG
CCGTGGCAGG CACCCGTGCT GCGCTTCCGC CGCACAAGGG CCGAGGCACT GCTTGGCATC
AGCCTTGATG AGACGTTCTG CCGCGAGACG CTTGAGCGCC TCGGCTGCAA GGTCGACGCC
GCAGACGCTG CCGACTGGAA GGTGACGGCC CCCAGCCATC GGCGCGACTT CGAACGCGAG
GCCGACCTCA TCGAAGAGGT GGCGCGCGTG CGGGGTATGG ATACCATCGA ACCGGTGCTG
CCCAAGGTCA TGCGTCCTCT CGACCGTGCT GGTGCGCCCG AATCGAAGTA CTCGTTCTGG
CTGCGTCTCA AGCACTGGGC CGCAGGACTC GGTCTCAACG AAGCCATCAA CTACAGCTTC
GTGGGGCAGA AGGACCTCGA CCACCTCAAT CTTGCCGTGG ACGGGCGCAT TCCCATCATG
AACCCGCTCA CCGCCGACCA GAACGTGCTG CGCACCGAAC TGGCACCCGG ACTGTTGCAG
AACCTGCGCC ATAACATCGC TCAGGGCAAC GCGGGCCTCC GCCTCTTCGA AGTGGCGCAC
ATCTTCGAGG CCGACGCCAC GTCAGACACC ACCGCCCGCG AGCGCGCGCG GCTCGACATC
CTCGTCTACG GCAGCAGGTA TGACAGCCAG TGGCCGCATG TCGAGGCTGA CGCCGACTAC
GCCGACATCA AGGGTATCGT GGAACACTGC CTCGCCTTCC TGCACCTCGA GGGCGCCACC
TTCACGCTTG CGGCGTCGCA TCCGTTCCTG ATGCCGTGTG TGGAAGTCGC CGTGCAGGGC
AGGCAGGTTG GCGTCATCGG GCGTGTGCGT CCTGAAATCG CCGATGCCTA CCACGCCCGC
AAGGACGCGT GGCTTGCCGA CCTCGACCTC GACGTGCTGC GCGAGTTGCA CGATGCCGCC
CGCATCGCGT TCCGGTCGCT GCCCGTCTAC CCGCCGGTGC GGCGCGACAT CACCGTGGCA
GCGCCCGGTT CGTTGCAGGT GGGTGCCGTA CTCGACCATA TCCTCGGGTT GCGCCTGCCG
CTGCTTTGCG GCGTGGAACT CATCGACGTG TTCGAACCGG AAGGGAAGGA CGAGCGTAAC
CTCACGTTCC GCATGACGTT CCGCCACGCC TCGCGCACTC TCAAGGATGC CGAGGTGGAC
AAGGAACGCG ATAAAGTGGC ACATTCCCTC GTGGAGAAGC TTCCCGTCCG CATCTGA
|
|---|
| Protein sequence | MLLSLKWLRE FVPFEGTAAE LGDRLTMLGL ELEEIIRPFD AIEPIVVGHV VSRERHPEAD
KLSVCKVDVG QGEPLDIVCG APNVAAGQRV PVALVGTTMP GGMVIKKAKL RGQPSHGMIC
SERELGLGED HDGIMVLPES FRIGARLVDE LDLDREVCDI AITPNRADCL SVLGLAREVA
LAFGLPLTMP ALDLKEEGAD ASNALRIDIP DASLCPLFHG RVLEGAAVRK SPSWMRYRLI
AVGVRPISNI VDVTNYILME LGQPLHAYDL DLLAGGRIEV SAAREGERLT TLDGVERVLT
SNDLLIRDGE KPVGLAGVMG GAETEISDKS SRVFLEAAVF RPGTIRKTAR RLGLSSEASY
RFERGVDQVV CTYAMNRAAQ LIAGLSGATL RPGICHNEPL PWQAPVLRFR RTRAEALLGI
SLDETFCRET LERLGCKVDA ADAADWKVTA PSHRRDFERE ADLIEEVARV RGMDTIEPVL
PKVMRPLDRA GAPESKYSFW LRLKHWAAGL GLNEAINYSF VGQKDLDHLN LAVDGRIPIM
NPLTADQNVL RTELAPGLLQ NLRHNIAQGN AGLRLFEVAH IFEADATSDT TARERARLDI
LVYGSRYDSQ WPHVEADADY ADIKGIVEHC LAFLHLEGAT FTLAASHPFL MPCVEVAVQG
RQVGVIGRVR PEIADAYHAR KDAWLADLDL DVLRELHDAA RIAFRSLPVY PPVRRDITVA
APGSLQVGAV LDHILGLRLP LLCGVELIDV FEPEGKDERN LTFRMTFRHA SRTLKDAEVD
KERDKVAHSL VEKLPVRI
|
|---|
| |