Gene Dvul_0564 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvul_0564 
Symbol 
ID4664226 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris DP4 
KingdomBacteria 
Replicon accessionNC_008751 
Strand
Start bp710207 
End bp711283 
Gene Length1077 bp 
Protein Length358 aa 
Translation table11 
GC content60% 
IMG OID639818774 
Productinner-membrane translocator 
Protein accessionYP_966014 
Protein GI120601614 
COG category[E] Amino acid transport and metabolism 
COG ID[COG4177] ABC-type branched-chain amino acid transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00158487 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCAACT ACACCCTCAA CATCGTGCTC GCGGCCCTCT GCCTGCTGGT GGTGGGCCTG 
TCGCAGTTCG GCGTGCTCGA CCAGTACTCC GAGACGGTGT TGATGTTCAT CGGCATCAAC
ATCATATTCG CCGCCAGCCT CAACATCGTG AACGGCTACA TGGGCGAGTT CTCGTGCGGT
CATGCCGGGT TCATGTGCGT CGGGGCCTAT GTCTCGTCGC TGCTTTCCGT GACGCTGTTC
ACCAACAACA AGGTTCTGGG TGCAGCCCTG CTTCCGCCGG AACTCGCTCC CATTCTGTTC
CCGGTGGTCA TCGGCATAGG GGGTTTCGTG GCGGCGGGCT TCGGCCTGCT GGTGGCCTTG
CCCTCGTTCC GCACCCGTGG CGACTATCTC GCCATCATCA CCATCGCGGC CAACTACATC
GTCATCTCGC TCATCGAGAA CCTCGAGTTC ATCGGAGGGC CGCGCGGTTT TCATGGCATG
AAGAAGGTCA TCAACGGTAT GCGCGACCTC GCGGATATTC CGTGGATGCT CATCTGGGTG
ATTCTGGGCA CGCTGTTCTC GCTGTGGTTG CTGCGTCGCC TTGTGACCTC GACCTACGGC
AAGGGCATCT CCGCCGTATG TCAGGACGAG GTCGCGGCGG AAATCATGAG TGTCGACACC
AACCACATCA AGCTGACGGC CTTCATGGTC TCCTCCGGTC TTGCCGGGGT GGCGGGGGGG
CTGTACGCGC ACATCTTCGG TTACGTGAAC CCGCAGGCCT TCAACATCCT CAAGTCCACC
GAAGGGCTGG TGATGGTCTA CCTTGGCGGC ATGGCCTCGC TTTCGGGGTC GGTGATGTCC
GCCATCCTGT TCACGCTGCT CATCGAGTCG TTGCGGTTCG TCATTCCCGG TCTCGATTCG
GTACTGCACA GCGTTGGGCT GCTCCCCGAC GGGTATGAGC TGAGCCAGAT ATGGAAGTGG
GTCATCATCC CGCTCATCCT CATTCTGCTC ATGCAGTTCA GACCGGAGGG CATCATGGGC
AACCGCGAGT TGTCCGACGT CTTCCCGAAA CTGCGCCGCT GGTACACGCT CAAATAG
 
Protein sequence
MRNYTLNIVL AALCLLVVGL SQFGVLDQYS ETVLMFIGIN IIFAASLNIV NGYMGEFSCG 
HAGFMCVGAY VSSLLSVTLF TNNKVLGAAL LPPELAPILF PVVIGIGGFV AAGFGLLVAL
PSFRTRGDYL AIITIAANYI VISLIENLEF IGGPRGFHGM KKVINGMRDL ADIPWMLIWV
ILGTLFSLWL LRRLVTSTYG KGISAVCQDE VAAEIMSVDT NHIKLTAFMV SSGLAGVAGG
LYAHIFGYVN PQAFNILKST EGLVMVYLGG MASLSGSVMS AILFTLLIES LRFVIPGLDS
VLHSVGLLPD GYELSQIWKW VIIPLILILL MQFRPEGIMG NRELSDVFPK LRRWYTLK