Gene Dvul_0551 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvul_0551 
Symbol 
ID4664127 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris DP4 
KingdomBacteria 
Replicon accessionNC_008751 
Strand
Start bp692758 
End bp693876 
Gene Length1119 bp 
Protein Length372 aa 
Translation table11 
GC content65% 
IMG OID639818761 
Productradical SAM domain-containing protein 
Protein accessionYP_966001 
Protein GI120601601 
COG category[H] Coenzyme transport and metabolism
[R] General function prediction only 
COG ID[COG1060] Thiamine biosynthesis enzyme ThiH and related uncharacterized enzymes 
TIGRFAM ID[TIGR00423] radical SAM domain protein, CofH subfamily 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0260021 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCGATA CGGACCACTA CGCCCGCCTC GGACTGGGCG AGATACGCGA CAAGGTCATG 
GCGGGCCACC GCCTGTCATA CGACGACGGG CTTCGCCTGT TCGCCTGCCC AGACATCACC
GCCATCGGCG CACTGGCGCA CCATGTGCGC ACACGCCTGC ATGGCGACAG GACGTATTAC
GTCGTCAACA GGCAGGTCAA CTACACCAAC ATCTGCGTCA ACGGTTGCCT CTTCTGCGCC
TTCCAGCGCG AACGCGGGCA GCAGGGGGCC TTTGCCCTCA CCCCTGACGA GATGGTGGCC
CGCGTCATGG ACGACGGCGG TGTACCCTTC AGCGAGGTGC ACATCGTGGG CGGCTGCCAC
CCCGACCTGC CGCTGGAGTG GTTCGAGGAT GTCATCCGCC GCATCCACGC AGCGCGTCCG
TCCATCGTGG TGAAGGCGTT CACCGCTGTG GAAATCGCCC ATTTCGCCAA ACTCGCAGGC
ATCGACACCG AAGAGGTTCT GCGTCGCCTC AAGGCCGCTG GCCTCTCGCA ACTGCCCGGT
GGCGGGGCCG AGATATTCGC GCCCGATGTC CGGCAGCGCA TCTGCCCCCG CAAGATAGAC
GCAGACGCAT GGCTGCGTGT GGCGGGCGAG GCGCACCGCC TCGGCATCGG CACCAACTGC
ACCATGCTCT TCGGGCACCT CGAAAGCGAG GCCGACAGGG TCGACCATCT GTGCCGTCTG
CGTGCCCAGC AGGACGAGAC GGGCGGCTTC ACCTGCTTCA TCCCCCTGCC CTTCCTCACC
GAGAACAGCC TCCTCAAGCT TCCACCTGAA CGCGTGGGGC AACATGTGGG TCTCGACAGG
CTGCGCACCG TGGCGGTGAG CCGCCTGATG CTCGACAACA TCGCGCACAT CAAGGCCTAC
TGGGTGATGA TGGGCGTCAA GCTGGCGCAG GTCGCGCTGC ACTACGGCGC CAACGACCTC
GACGGCACCA TCGTCGAAGA GAAGATAGGC CACATGGCAG GTTCCGACGC GGTACAGGCC
ATGACCATCG CCCAGCTTGA AGACATGATA CGCCGTTCCG GTTTCACGCC GGTGCGCCGC
GACACCCACT TCAACCCCGT CGAGGAGGCT CGGGCATGA
 
Protein sequence
MLDTDHYARL GLGEIRDKVM AGHRLSYDDG LRLFACPDIT AIGALAHHVR TRLHGDRTYY 
VVNRQVNYTN ICVNGCLFCA FQRERGQQGA FALTPDEMVA RVMDDGGVPF SEVHIVGGCH
PDLPLEWFED VIRRIHAARP SIVVKAFTAV EIAHFAKLAG IDTEEVLRRL KAAGLSQLPG
GGAEIFAPDV RQRICPRKID ADAWLRVAGE AHRLGIGTNC TMLFGHLESE ADRVDHLCRL
RAQQDETGGF TCFIPLPFLT ENSLLKLPPE RVGQHVGLDR LRTVAVSRLM LDNIAHIKAY
WVMMGVKLAQ VALHYGANDL DGTIVEEKIG HMAGSDAVQA MTIAQLEDMI RRSGFTPVRR
DTHFNPVEEA RA