| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dvul_0498 |
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| Symbol | |
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| ID | 4662701 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio vulgaris DP4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008751 |
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| Strand | + |
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| Start bp | 635363 |
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| End bp | 638575 |
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| Gene Length | 3213 bp |
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| Protein Length | 1070 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 639818708 |
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| Product | hydrophobe/amphiphile efflux-1 (HAE1) family protein |
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| Protein accession | YP_965948 |
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| Protein GI | 120601548 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.249321 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.409358 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAAGAT TCTTCATAGA CAGGCCCGTC TTCGCGTGGG TCATCGCCAT CATCATCATG
CTGGCGGGGG CCCTGTCGAT TCTGAGCCTG CCCGTCTCGC AGTATCCCAA GATAGCGCCC
ACATCGGTCA ACATCAGTGC CTCGTATCCC GGTGCCTCGG CCAAGACCGT CGAAGACACC
GTCACGCAGG TCATCGAACA GAAGATGAAG GGCATCGACA GCCTGCGCTA CATGTCGTCC
ACCAGTGACG CCACCGGGCA GGTCTCCATC ACCCTGACCT TCGACGCCAG CACCGACCCC
GACATCGCGC AGGTGCAGGT GCAGAACAAG CTTGCGCTGG CAACCCCCAT GCTGCCCGAG
GCCGTGCAGC GGCAGGGCAT CACGGTGAAC AAGAGCACGT CGAGCTTTCT GATGATCATC
GCGCTGGCGT CGGACGACCC GTCCCTGACG GGGCGCGACC TCAGCGACTA TGCCGCCACC
TACCTGCTCG ACCCCATCAG CCGTGTGGAC GGCGTGGGCG AGACGCAGCT CTTCGGCGCA
CAGTACGCCA TGCGCGTGTG GCTAGACCCG CACAAGCTCA TGAACTACAG GATGACCCCC
GCGGATGTGC GTAGCGCCAT CACCGCCCAG AACACCCAGA TATCGGTGGG GCAGATAGGC
GGTACGCCTG CCGTGCCCGG ACAGGGGATG AGCTTCACCA TCCTCTCGCA GTCGCTGTTG
CAGACGCGCG AGCAGTTCGA GCGCATCGTG CTGCGCGTGG AACAGGATGG CTCGACGGTG
CGCCTTGCCG ATGTCGCACG GGTAGAACTT GGCAGCGAGA ACTACGACGC CGTCTCGCAC
TTCAACGGCA AGCCCTCCAC CGGTATCGCC ATCAAGCTGG CGACCGGGGC CAACGCGCTG
GACACGGTCA AGCGTGTGCG TACCACCATG GAAGGTCTGG CCAAGAACCT GCCGGAAGGC
ATCCGCTGCG TCTTCCCTTA CGACACCACC CCCTTCGTGC GCGTGAGCAT TGAAGAGGTG
GTCAAGACGC TGGCCGAGGC CATCGTGCTG GTGTTCCTTG TCATGTACCT GTTCCTCCAG
AACATCCGCG CCACCATCAT CCCCACCATC GCCGTTCCGG TCGTGCTTCT CGGCACCTTC
GGGGCGCTGG CGGCCTTCGG CTTCTCCATC AACATGCTGA CCATGTTCGG CGTGGTGCTC
GCCATCGGCC TGCTGGTGGA CGACGCCATC GTCGTGGTCG AGAACGTCGA ACGCATCATG
TCGGAGGAGG GGCTGCCCCC TCGCGAGGCC ACCCGCAAGT CCATGGGTGA AATCACCGGG
GCACTAGTGG GCATCGCGCT GGTGCTTTCG GCGGTGTTCA TCCCCATGGC GTTCATCAAG
GGTTCGTCGG GCGTCATCTA CCGTCAGTTC TCACTCACCA TCGTCTCTGC CATGACCCTG
TCCGTGGTGG TCGCGCTGGT GCTCACCCCC GCCCTGTGCG CCACCTTCCT GAAGCCCCTG
CACAAGCACG AGCATCAGGC GCAGGGGGGC TTCTTCGGCT GGTTCAACCG CATGTTCGAC
CGCACCAGCC GGGGCTACCG CAAGCAGGTG ACGGGCGTGA CCGGTCGCGT GGGCCGGACG
ATGTGCATCT ACGCGCTGCT GCTGGCGGGT ACGGCATTCC TCTTCATGCG GCTGCCCACC
TCGTTCCTGC CCGAAGAGGA CCAGGGCGTC ATCTTCAGCC TCGTGCAACT GCCCACGGGT
TCACCGCAGG AGAAGACCCT CGAAGTGCTC AAGAAGCTGG AGCACCATTA CCTCGTCGAT
GAGAAGGAGA CGGTGAACTC GCTGTTCACC GTGGCGGGCT TCAGCTTTGC CGGACGCGGT
CAGAACGCGG GGCTTGCCTT CGTGCAGCTC AAGCCGTGGG ATGAACGCAA GGGCGAGGGC
ATGAGCGCGG CGGCGGTGGC CGGGCGTGCC ATGCGGGCCT TTTCGCGCAT CCGCAACGCC
GTGGTCTACG CCTTCACGCC GCCCGCCGTG CAGGAACTCG GCAACGCCTC GGGCTTCAAC
CTGTTCCTGC AGGACAGGGA GGGCGTGGGG CATGAGGCGC TCATGCAGGC GCGCAACCAG
CTTCTGGGCA TGGCGGCGCA GAACCCCGCC ATCGCCGTGC TGCGCCCCAA CGGGATGGAG
GATACGCCGC AATTCCGCAT CGACGTGGAC GCCGCCAAGG CGGGCGCGCA CGGGCTGACC
ATGGCGGACG TCAACGGCGT GCTCTCCACG GCCCTTGGCG GTACGTACGT CAACGACTTC
ATCGACCGCG GGCGCGTCAA GAAGGTCTAC CTGCAGGGCG ACGCACCCTT CCGCATGATG
CCCGAGGACA TCAACGACTG GCACGTGCGT AACGCACAGG GCAACATGGT GCCGTTCTCG
GCGTTCTCGA CCGCCAGCTG GACCTACGGT TCGCCGCGTC TCGAACGCTA CAACGGTCTG
CCCGCCGTCG AACTCGTGGG TTCCGCCGCC CCCGGCAAGA GCACCGGTGA GGCCATGCAG
GCCGTCGAGG ACATGGCGGC GAAGCTTCCG CCCGGTGTGG GCATCTCGTG GACGGGCCTC
TCCTATCAGG AACGCATGAG CGGGTCGCAG GCGCCGGCGC TGTACGCCAT CTCCATCCTC
GTGGTGTTCC TGTGCCTTGC AGCCCTCTAC GAGTCGTGGT CGGTACCCAC CGCGGTCATC
CTCGTGGTGC CGCTGGGCAT CATAGGTGCG CTCATGGCCA CACTCGGGCG CGGTCTCAAC
AACGACGTGT TCTTTCAGGT GGGCCTGCTG ACCACCATCG GCCTCGCGGC CAAGAACGCC
ATCCTCATCG TGGAATTCGC CATGCACCTC GTGAAGTCGG GCAGGCCCCT GCTGGATGCC
ACGGCCGAGG CGGCACGGCT GCGGCTGCGG CCCATCCTCA TGACCTCGCT GGCCTTCCTG
CTGGGCGTGC TGCCCATGGC CATCAGCACC GGGGCGGGGT CGGGCAGCCA GAGGGCCATC
GGCACCGGCG TCATGGGAGG CATGTTCTCG GCCACAGTGC TGGCGGTGTA CTTCGTGCCC
GTGTTCTTCG TGATGGTCTA CCGCTTCGCC ATGCGGAAAC GTGGCGGCGG CCCTGAAGAC
GGTGCCCACG GGCACGGTGC GCATGGGGCC GCAATCCCGG CAACGGCGCA GGATGATGGA
CAGGCGGAAG CCTCCGGCGA GGTGGCACGA TGA
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| Protein sequence | MARFFIDRPV FAWVIAIIIM LAGALSILSL PVSQYPKIAP TSVNISASYP GASAKTVEDT
VTQVIEQKMK GIDSLRYMSS TSDATGQVSI TLTFDASTDP DIAQVQVQNK LALATPMLPE
AVQRQGITVN KSTSSFLMII ALASDDPSLT GRDLSDYAAT YLLDPISRVD GVGETQLFGA
QYAMRVWLDP HKLMNYRMTP ADVRSAITAQ NTQISVGQIG GTPAVPGQGM SFTILSQSLL
QTREQFERIV LRVEQDGSTV RLADVARVEL GSENYDAVSH FNGKPSTGIA IKLATGANAL
DTVKRVRTTM EGLAKNLPEG IRCVFPYDTT PFVRVSIEEV VKTLAEAIVL VFLVMYLFLQ
NIRATIIPTI AVPVVLLGTF GALAAFGFSI NMLTMFGVVL AIGLLVDDAI VVVENVERIM
SEEGLPPREA TRKSMGEITG ALVGIALVLS AVFIPMAFIK GSSGVIYRQF SLTIVSAMTL
SVVVALVLTP ALCATFLKPL HKHEHQAQGG FFGWFNRMFD RTSRGYRKQV TGVTGRVGRT
MCIYALLLAG TAFLFMRLPT SFLPEEDQGV IFSLVQLPTG SPQEKTLEVL KKLEHHYLVD
EKETVNSLFT VAGFSFAGRG QNAGLAFVQL KPWDERKGEG MSAAAVAGRA MRAFSRIRNA
VVYAFTPPAV QELGNASGFN LFLQDREGVG HEALMQARNQ LLGMAAQNPA IAVLRPNGME
DTPQFRIDVD AAKAGAHGLT MADVNGVLST ALGGTYVNDF IDRGRVKKVY LQGDAPFRMM
PEDINDWHVR NAQGNMVPFS AFSTASWTYG SPRLERYNGL PAVELVGSAA PGKSTGEAMQ
AVEDMAAKLP PGVGISWTGL SYQERMSGSQ APALYAISIL VVFLCLAALY ESWSVPTAVI
LVVPLGIIGA LMATLGRGLN NDVFFQVGLL TTIGLAAKNA ILIVEFAMHL VKSGRPLLDA
TAEAARLRLR PILMTSLAFL LGVLPMAIST GAGSGSQRAI GTGVMGGMFS ATVLAVYFVP
VFFVMVYRFA MRKRGGGPED GAHGHGAHGA AIPATAQDDG QAEASGEVAR
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