Gene Dvul_0454 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvul_0454 
Symbol 
ID4662178 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris DP4 
KingdomBacteria 
Replicon accessionNC_008751 
Strand
Start bp579469 
End bp580230 
Gene Length762 bp 
Protein Length253 aa 
Translation table11 
GC content66% 
IMG OID639818663 
Producthemolysin A 
Protein accessionYP_965904 
Protein GI120601504 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1189] Predicted rRNA methylase 
TIGRFAM ID[TIGR00478] hemolysin TlyA family protein 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGCGAA AGGAACGTGC AGACCAGCTT GTACACGAGG CGGGACTTGC CGAAAGTCGT 
GAACAGGCCA AGCGCATGAT CATGGCGGGG CAGGTCTTCG TGCTGCGGGG GCCCCTCGCC
GCCCCGGTCG CCGAACCTGT GGACAAGCCC GGTCACAAGT TCGACCTCGA CGCCCGCTTC
GAAGTGCGCG GCCGCGAGCG TTTCGTCTCG CGCGGTGCCT ACAAGCTGCT GACGGCCATC
GACTATTTCA AGTTTGATGT GACGGGTTTC GTGGCGCTGG ATGCCGGTGC CTCCACGGGC
GGGTTCACCG ACTGCCTGCT GCAGCACGGC GCGGTGCGGG TGTATGCCGT CGATGTGGGG
CATGGGCAGT TGCATGAGAG GATGCAGGCC GACCCCCGCG TGGTGAACCT CGAACGTACC
AACCTGCGCA CAGCACCGGC GGACCTCATC CCCGAACAGG TGGACATCGT GGTGGCGGAC
GTGTCGTTCA TCTCGCTGAC GCTGGTGCTG GAACCGTGCA TGCAGTGGCT GAAGCCCGGC
GGGCGCGTGG TGGCGCTGGT CAAGCCGCAG TTCGAGGTGG GGGCGCACCA GACGGACAGG
GGTGTCGTGC GCGACGAGGG GTTGCAGCAG GCGGCCGTGG ACAAGGTGCT GACCTACTGC
CGCGAGACGC TGGGGCTGGT GCATGAAGGC ACCGTGCCTT CGGCCATCAA GGGCCCCAAG
GGCAATCAGG AGTATCTCGT CTGTCTGCGC CGCGAGGCGT GA
 
Protein sequence
MPRKERADQL VHEAGLAESR EQAKRMIMAG QVFVLRGPLA APVAEPVDKP GHKFDLDARF 
EVRGRERFVS RGAYKLLTAI DYFKFDVTGF VALDAGASTG GFTDCLLQHG AVRVYAVDVG
HGQLHERMQA DPRVVNLERT NLRTAPADLI PEQVDIVVAD VSFISLTLVL EPCMQWLKPG
GRVVALVKPQ FEVGAHQTDR GVVRDEGLQQ AAVDKVLTYC RETLGLVHEG TVPSAIKGPK
GNQEYLVCLR REA