Gene Dvul_0393 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvul_0393 
Symbol 
ID4663797 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris DP4 
KingdomBacteria 
Replicon accessionNC_008751 
Strand
Start bp505263 
End bp505916 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content64% 
IMG OID639818595 
Productphosphatidylserine decarboxylase 
Protein accessionYP_965843 
Protein GI120601443 
COG category[I] Lipid transport and metabolism 
COG ID[COG0688] Phosphatidylserine decarboxylase 
TIGRFAM ID[TIGR00164] phosphatidylserine decarboxylase precursor-related protein 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGAAACC CCTCCATCAG CATCACCCCC GAAGGCCTAC CCGCCATCGG TCTTTGCACC 
CTCGCAACCC TCACCTTCGC GCTCATCGGC TGCTGGGTGA TGGCTGTCAT CTTTCTGCTG
CTCACGTGGT TCTGCTGCCA CTTCTTCCGC GACCCTGAGC GCGTCACGCC CACAGGGGCA
GGTCTCGCGG TCAGCCCCGC GGACGGCCGG GTCATCCGCG TCGAACCGGT CACCGACCCC
ATCACGGGTG AGAAGCGCAC CTGCGTGTGC ATCTTCATGA ACGTGTTCAA CGTCCATGTG
AACCGCATGC CCGTGGCGGG CACCATCCGC AACATCGTCT ATCATCCCGG CAAGTTCTTC
AACGCCGCGT GGGACAAGGC TGCCACCGAC AACGAACGGT GCGACTACCT CATCGAGGAT
GCCGAAGGCG GCAAGTGGAC CATGGTGCAG ATAGCCGGAC TCATCGCGCG GCGCATCGTC
TGCCGCGTGG ACGAGGGCGA CACGCTGACC CGCGGCGAAC GCTATGGCAT GATACGCTTC
GGTTCGCGGG TTGACCTTTA CCTGCCGGAC GGCTATTGTC CGGCCGTGTC CGTCGGGGAA
CATGTCTTCG CGGGGCAGAC CATCGTCGCC CGCAAGTCCC CTGAAGGGGC CTAG
 
Protein sequence
MRNPSISITP EGLPAIGLCT LATLTFALIG CWVMAVIFLL LTWFCCHFFR DPERVTPTGA 
GLAVSPADGR VIRVEPVTDP ITGEKRTCVC IFMNVFNVHV NRMPVAGTIR NIVYHPGKFF
NAAWDKAATD NERCDYLIED AEGGKWTMVQ IAGLIARRIV CRVDEGDTLT RGERYGMIRF
GSRVDLYLPD GYCPAVSVGE HVFAGQTIVA RKSPEGA