Gene Dvul_0315 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvul_0315 
Symbol 
ID4663171 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris DP4 
KingdomBacteria 
Replicon accessionNC_008751 
Strand
Start bp395739 
End bp398981 
Gene Length3243 bp 
Protein Length1080 aa 
Translation table11 
GC content66% 
IMG OID639818516 
Productmulti-sensor hybrid histidine kinase 
Protein accessionYP_965765 
Protein GI120601365 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.836598 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCCATT CATCACGGTC AGCTATCGGT CTGCAAGTGC GCGTCAGCCT GCTGGTGCTC 
ATGGTCACCA TGGTGTTGCT TGCCGGATTC GCCTTCTGGG AGCACACGCT GCTGCGCGAG
GCCGAAGAGA CGCAACTGCG TCAGGAGACC CGGTTGCTGG CCGACAGGGC GGCACGGCTT
CTCGCCCTTC CGCTATGGAA CCTCGACGGC CCTTCGGCGC GAGCCATCAT CCAGGCCGAG
ATGGACGACC CCCGCGTCTA CGGCATCGCC GTGTTCGAAC AGGGGCGCCA GCTGTTCGAG
GGGATGCAGC GCGACGCGTC GTGGCGTGTG GTGCCGTGGG TCGGCAGCGC GCCGCCGGAT
GTCGTAGAGG AGCGTCGCGA CCTCGTCGTG GAAGGCACGC AGGTCGGGTC GCTATCCATC
ATGGTGTCGC CGCGCTTTCT TGCGGCGCGC CTTGCCGAGC GTTTTCAGCA GGCCGTGTGG
CGTTACACCC TTCTGGCGGG GATTCTGGCG GTGGGGTTGA TGCTGCTGGT GCGGTCGGTG
CTCATTGCGC CGCTGGGCCG TCTTGGCGGG GTGGCGCGTC GTGTCACCAG TGAGGAGAAT
TTCGCGCTGC GTGCCCCCAA GGGGGCCGAT GATGAGATAG GTGAGCTTGT GGACAGCTTC
AATGCCATGC TGGAGCGCAT CGAACAGCGC AACCGGCTGC TTGGTGAGCA ACGCAGGCGT
CTTGAGATGG AGGTGAGCGA ACGTACCGCC GAGTTCGTGG GGGCACGCGA ACGTGCCGAG
CGCGAGAGCA AGGCCATGGC CGATTTCCTT GCCGCCATCA CCCACGAGGT ACGCACGCCC
ATGACCGGTA TCATAGGGCT TCTGGACATT TCACTGCGCG GCCAGCTCGA ACCCCGGCTG
CGCGAGCATC TTGAGATCGT GCGCTCGTCG AGCCATGCCC TGCTCGATGT CATCAATGGT
GTTCTCGACT TCTCGCGCAT CGAGGCCGGC AAGTTGCGTA TCGAGCGCAT TCCCTTCGCC
TTGCGCGAGT CTGTGGAGGA TGTGCTCGAC CTGTTCCGCG CCCATCTTGC GGAACGCGAT
GTCGCCCTTG TGCTGGATAT GGCCTCCGAC CTGCCGTGCA AGGTCGCGGG AGACCCCACC
CGTTTGCGAC AGGTGCTGGT CAATATCGTG GGCAACGCCT TCAAGTTCAC GGAGCAAGGC
GAGATCGTGG TGCGTATATC CCACGAGCGG CAGGGCGACG GCAGCGTTCT GCTCCGGTTC
GCCGTGCGGG ATACCGGGGT GGGGATACCC GCAGAGGCCC GCAAGCGCCT GTTCGAGATG
TTCAGTCAGG CCGATGCCAG CGTCGCACGA CGATTCGGTG GAAGCGGTCT GGGGCTAGCC
ATCGCACGTG AGCTTGTGCG GCTCATGGGT GGAAGCATCG AGGTGGACAG CACACCGGGG
CGTGGCACCG TGTTCCGGTT CACGGTGCAC TGCGGCTTCG TCGAAGGGCC GTCTGACCCT
CTGCCCCTGC CGCAGGGCGT GCGGGTGGTT CTCGGCGAGA GTCATGCCTC GCTACAGCGT
GTGCTGAGCG GGCTGTTGCG GCGGTGGGGG GCCGAGGTCG TGGCGGTGTC TGGCGCTGCC
GCCCTGAAGG ACGCCGCCGC CGATGCCGAC GTGTGCGTGC TGTCGTCGCA CCTGCAGGGG
GGGCTTGCCG CCTTGTCCCG TCCGGGGCAG CCGGGGCCTC CTGTACTGTT GCTTGTCCCC
TATGGAGAGG AACCCGAACC TTCGCTCTGT GCCGGTGCCG GTGTCGTTGC GTTCGTGGGG
CGCCCGGTGC GCGCGGCCAC CCTGCGCGCC GCACTAGACG CGGTCTTTGC CCCGGGGATG
CCTGATGGCG CGCAGGCGAC AGCCATGAAG GGCGACATGA GGGCAGGGCT CCACATCCCA
TCTTCGCGAG ACGGGAGTGG TGGTGCGTCC TCTGCGGCAC GGGTGGTCGA AGGGCAGGCT
GTCACCGGAC CGATGACGCA GCCGGGGGCT ATGCCGTCCG TGGGCGCGTC GGGGGATGGG
CATGATGCCG ACCAACCCGT CCATGAGGGG GCTTCGGGGC TGGAGGGGAT GCGCGTCCTC
GTCGCCGAGG ATGATGACGT GAGTCGTCTG GTCTTGCGGG AGATGCTCAC CGGTTTTGGC
GTGCAGGTGA ATGAAACAGC AGATGGCGCG ACCATGCTCG CGCATTTTGC CGCTGCCCCT
TACGATGTCG TGCTCATCGA TGTGCAGATG CCAGTACTGG ACGGATTTGC AACGCTTGAA
CGCCTGCGGG CATTACCGGA CGGGGATACC GTGCCTGTGG CGCTTTTCAC GGCCCAGAAG
CTGTCGGTTG CCGAACTTGC CGAACGCGGC ATTCGCGTTG CCGGAGTCGT GGAGAAGCCC
CTCGAGATGG AGACTCTGGT GGCGTTCTTG CGTGGCTTGC GGGCCGTGAA GGGGCAAGGG
CGGCACGATG TCGCAGGGGC GGACGCGGCA CCACGCATGG CGGGGCAGGA ACACGGTGAG
AGTGCGGTCA CTGACGCTAC GCTGTCGCCG AACGCCGCGA CCTTGATCTC GGGCGAGACC
CTTGTTCTTG GGGGGACTGA CGATGGGGCT GCCACCGGGG GCGTCGGTGT ACCCGGGATG
GCAGCCGTAG CGGAGGTGAT TGCATCCGGC GGGCACGAGA CGGAAACGTC GTCGTCCACA
TCGGACGCGA ACGCGTCGTC GTTCGAATCG GGCGCTGCTA CGCCCTCGTC CATACCGGGC
GACGGGGCGT CGTCGCACAT GCCGGATGCC GAAGCGTCGT CTGTCCCTGC GGGCGTGGCG
GACGTCTCTG CCGTCGCCGC AACGACAACT TCCCGTTCCC GTGCCCCGCG CCGTCTCGCC
GGACCTCCAC TCCCCACCGC CCTTGAAGGG GTGGACATCG GCGAGGTGCT CACACGCGTG
GGGGGAAAGG AATGGCTGCT GCTCAAGGTG CTGCGGAGTT TCGCCACGGC GTACGCCGAT
GCTGCGGACG GACTTGCCGC CATGGTCGAA GCCGGCGACG ATGAAGCGGT CAAGCTGCGG
GGGCATACAC TCGCCGGGGC GGCGGGCAAT ATTTCGGCCC ATGAACTGCG GGCCATCTGC
CTCGCTCTTG AAATGGGCGG TGACAAGTCG ACACAACAGT CGCTTGTGGC TGCGTTCAGG
GGCGAACTCG ACCGGGTCGT CACCTCCATC CGCGAAATGC TTGCACGTTA CGAAGAGCCC
TAG
 
Protein sequence
MPHSSRSAIG LQVRVSLLVL MVTMVLLAGF AFWEHTLLRE AEETQLRQET RLLADRAARL 
LALPLWNLDG PSARAIIQAE MDDPRVYGIA VFEQGRQLFE GMQRDASWRV VPWVGSAPPD
VVEERRDLVV EGTQVGSLSI MVSPRFLAAR LAERFQQAVW RYTLLAGILA VGLMLLVRSV
LIAPLGRLGG VARRVTSEEN FALRAPKGAD DEIGELVDSF NAMLERIEQR NRLLGEQRRR
LEMEVSERTA EFVGARERAE RESKAMADFL AAITHEVRTP MTGIIGLLDI SLRGQLEPRL
REHLEIVRSS SHALLDVING VLDFSRIEAG KLRIERIPFA LRESVEDVLD LFRAHLAERD
VALVLDMASD LPCKVAGDPT RLRQVLVNIV GNAFKFTEQG EIVVRISHER QGDGSVLLRF
AVRDTGVGIP AEARKRLFEM FSQADASVAR RFGGSGLGLA IARELVRLMG GSIEVDSTPG
RGTVFRFTVH CGFVEGPSDP LPLPQGVRVV LGESHASLQR VLSGLLRRWG AEVVAVSGAA
ALKDAAADAD VCVLSSHLQG GLAALSRPGQ PGPPVLLLVP YGEEPEPSLC AGAGVVAFVG
RPVRAATLRA ALDAVFAPGM PDGAQATAMK GDMRAGLHIP SSRDGSGGAS SAARVVEGQA
VTGPMTQPGA MPSVGASGDG HDADQPVHEG ASGLEGMRVL VAEDDDVSRL VLREMLTGFG
VQVNETADGA TMLAHFAAAP YDVVLIDVQM PVLDGFATLE RLRALPDGDT VPVALFTAQK
LSVAELAERG IRVAGVVEKP LEMETLVAFL RGLRAVKGQG RHDVAGADAA PRMAGQEHGE
SAVTDATLSP NAATLISGET LVLGGTDDGA ATGGVGVPGM AAVAEVIASG GHETETSSST
SDANASSFES GAATPSSIPG DGASSHMPDA EASSVPAGVA DVSAVAATTT SRSRAPRRLA
GPPLPTALEG VDIGEVLTRV GGKEWLLLKV LRSFATAYAD AADGLAAMVE AGDDEAVKLR
GHTLAGAAGN ISAHELRAIC LALEMGGDKS TQQSLVAAFR GELDRVVTSI REMLARYEEP