Gene Dvul_0267 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvul_0267 
Symbol 
ID4663562 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris DP4 
KingdomBacteria 
Replicon accessionNC_008751 
Strand
Start bp328085 
End bp328843 
Gene Length759 bp 
Protein Length252 aa 
Translation table11 
GC content66% 
IMG OID639818464 
Product3-deoxy-manno-octulosonate cytidylyltransferase 
Protein accessionYP_965718 
Protein GI120601318 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1212] CMP-2-keto-3-deoxyoctulosonic acid synthetase 
TIGRFAM ID[TIGR00466] 3-deoxy-D-manno-octulosonate cytidylyltransferase 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.848803 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGCAC CCCGAACCTG CTACGGCATC ATCCCAGCGC GCTACGCTTC GTCGCGCTTT 
CCGGGCAAGC CCCTTGCCGA CATTCTGGGC AGGCCCATGT TCTGGCATGT CTACGACAGG
GCACGGCGTT GTGCGGCCTT CGACGAGGTG GCCCTCGCCA CCGACGACGC CCGCATCGCG
GACGCCGCGA ATGTACTCGG CGTCCCCTGT GTCATGACGG CGGAGCATCA CCCGAGCGGC
ACCGACCGGG TACACGAGGC CGCCATGCGC CTCGGCGTGG CCGATGACGC GGTGGTGGTC
AACATACAGG GTGATGAACC GGCACTCGAC CCGCGCATGC TCGACCAGCT TGTGGCCCCG
TTCGCCGACG CATCGGTGCG CGTCGCCACG CTGGCCATGG CCCTGTCAGC CCAAGAGGCG
CAAAGCCCCG ACAGGGTCAA GGTCGTGGTC GCCGCCAACG GCGATGCCCT CTATTTCTCG
CGGGCGGACA TACCCTTCGT GCGCGACGGG GATGTCGGGG GCGATACCGC AGGGCGTCTC
GGCCATATCG GGCTGTACGC CTTCCGCATG GAGGCGCTGC GGCGTTTCAC GCAGCTACCG
CCTTCACGAC TTGAACAGAC TGAGAAACTC GAACAGCTGC GGCTGCTCGA GAACGGTATA
GCCATTCGTG TGGTGCCTAC CACCTACCGT ACCCACGGCG TGGACAGGCC CGAAGACATC
GACGTGATCA TCAACCTGCT GAGGGAGAAC GACGGATGA
 
Protein sequence
MSAPRTCYGI IPARYASSRF PGKPLADILG RPMFWHVYDR ARRCAAFDEV ALATDDARIA 
DAANVLGVPC VMTAEHHPSG TDRVHEAAMR LGVADDAVVV NIQGDEPALD PRMLDQLVAP
FADASVRVAT LAMALSAQEA QSPDRVKVVV AANGDALYFS RADIPFVRDG DVGGDTAGRL
GHIGLYAFRM EALRRFTQLP PSRLEQTEKL EQLRLLENGI AIRVVPTTYR THGVDRPEDI
DVIINLLREN DG