| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dvul_0244 |
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| Symbol | |
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| ID | 4662924 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio vulgaris DP4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008751 |
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| Strand | + |
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| Start bp | 300445 |
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| End bp | 302181 |
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| Gene Length | 1737 bp |
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| Protein Length | 578 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 639818440 |
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| Product | sigma-54 dependent trancsriptional regulator |
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| Protein accession | YP_965695 |
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| Protein GI | 120601295 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains
[COG3829] Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.16116 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATGCAA AGGCGCAACA GGGAGGAGGG GCCATGCATG AGACCGACCC GCGTTTTCTT
CGCGGCATCA TCGACACCCT GAACGAGGGG CTGGTCTTCG TCGGACCCGA CGGACGCATC
CGCATGGTGA ATCCGGCGCT GGAGCGGCTG ACGGGCTTCA CCCGTGATGA ACTGGTGGGA
CGCGCGTGTT CCGTGCTGCA ATGTGATGCC TGTGTCCGGC AACGCAAGGA TGGCGGGGCG
CACTGGTGCC GCCTTTTCGA CCGCAAGGGC GAGAACCGCA AGCGGTGCAC TGTGCGCCGC
AAGGACGGTA CGGTGGTTCC CGTGCTCAAG AACGCCCGCG TGCTCACCGA TGGACAGGGA
GGCGTGCAGG GTGCCGTGGA GATCATCACC GACCTTTCCG AACTGGTGGA CAAGGAGCGC
CGTATCGAAG AGCTTTCGCG CCTTCTCGGG TCGGAGGAGG GCTTCGCGGG CATGGTCGGT
GCGTCCTCAG CCATGCATCG TACCTTCAGG TTGCTTGAAC GTGCCGCAGA GAGCGATGCC
CCGGTGTTGT TGCTGGGGGC GTCTGGCACG GGCAAGGAAC TGGCTGCGCG GGCGGTGCAC
GACCTGGGCA GGCGACGCAA CGGCCCCTAT GTGCAACTCA ACTGTGCGGC CCTAAACGAG
AATCTGCTTG AAAGCGAGTT GTTCGGTCAC GTGCGCGGGG CCTTCACCGG TGCTGTACGC
GACAGGCAGG GACGGTTCGA GGCAGCCCAT GGCGGAGACC TCTTCCTCGA CGAGATAGGC
GACCTGCCCC TGCCGACGCA GGTGAAGCTG TTGCGCGTGC TTGAGACCAA ACGCATCGAG
AGGGTGGGCG ACAATCACCC CCGTGAGGTG GACGTGCGCA TCATCGCCGC CACCAACAGG
AATCTCGGCG CGCTCGTGCG CGCGGGGCGT TTCCGTGAAG ACCTGCTGTT TCGCATCAAC
GTCATTCCGG TCACGCTGCC TGCGCTGGCT GCACGGCGTG AAGACATTCC CCTGCTGGCG
GCCTTCTTCC TGCGTGCCAT CACCGAACGT GACGGTCGCA AGGCTGGAGG GCTGACGCCG
GCGGCCCTGC GGCATCTGGT GGCCTATACA TGGCCGGGAA ACGTGCGCGA ATTGCGTAGC
GCCATGGAGT ATGCCTGTGT GGTGGCGGGC GGAGGTGACA TCGACGCGGA ACATCTCCCG
CCGCACATCA TCGACGGGAC GCCGGAATGC GGGGGGCATG CGCTGGCTGC CACCGTGGCC
GAAAGGACAG GGCCGGATGC CGCACAGGAG GCCCCTGCGG ATGAGGTGCG CCCTGATGCC
CCAGTGCGTG TTGCCGGGCC CGGTGCCGGT GGGGGCACGC AGGGTCGGGC CGGTGAAGTC
GGTGCTGTTG CCGCGATACC TGTCGTGTCC GCTGTGCCCG TGGTGCCCGC TGTGCCTGTT
GTGACCGACT CCGGCCCCGA CCATGAGATG ATGTCGGTGG ACGCCCATGA CCGCGTGATG
TCACTGCCCG GCACTTCCGG CGAGGCTGGC ACGCCGCCGC CCGCCATGGC GGACACCTTC
CCGCCAACGC AACGCGAATT GCGCGAAGGA GAGGAGCGAA GGCAGCTTCT TGCGGCGTTG
CGTCGTGCAC GCGGCAATAT CTCCGAGGCG GCGCGCCTGC TTGGGGTATA CCGGGGGACG
GTACGTAACC GCATGGCGCG TTACGGCATC GACCTTCACC GCGAGGTGAA AGGATGA
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| Protein sequence | MDAKAQQGGG AMHETDPRFL RGIIDTLNEG LVFVGPDGRI RMVNPALERL TGFTRDELVG
RACSVLQCDA CVRQRKDGGA HWCRLFDRKG ENRKRCTVRR KDGTVVPVLK NARVLTDGQG
GVQGAVEIIT DLSELVDKER RIEELSRLLG SEEGFAGMVG ASSAMHRTFR LLERAAESDA
PVLLLGASGT GKELAARAVH DLGRRRNGPY VQLNCAALNE NLLESELFGH VRGAFTGAVR
DRQGRFEAAH GGDLFLDEIG DLPLPTQVKL LRVLETKRIE RVGDNHPREV DVRIIAATNR
NLGALVRAGR FREDLLFRIN VIPVTLPALA ARREDIPLLA AFFLRAITER DGRKAGGLTP
AALRHLVAYT WPGNVRELRS AMEYACVVAG GGDIDAEHLP PHIIDGTPEC GGHALAATVA
ERTGPDAAQE APADEVRPDA PVRVAGPGAG GGTQGRAGEV GAVAAIPVVS AVPVVPAVPV
VTDSGPDHEM MSVDAHDRVM SLPGTSGEAG TPPPAMADTF PPTQRELREG EERRQLLAAL
RRARGNISEA ARLLGVYRGT VRNRMARYGI DLHREVKG
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