Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dvul_0099 |
Symbol | |
ID | 4664282 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio vulgaris DP4 |
Kingdom | Bacteria |
Replicon accession | NC_008751 |
Strand | + |
Start bp | 118322 |
End bp | 118969 |
Gene Length | 648 bp |
Protein Length | 215 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 639818293 |
Product | hemolysin III family channel protein |
Protein accession | YP_965550 |
Protein GI | 120601150 |
COG category | [R] General function prediction only |
COG ID | [COG1272] Predicted membrane protein, hemolysin III homolog |
TIGRFAM ID | [TIGR01065] channel protein, hemolysin III family |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.00987252 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.4517 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGGCTGTAC GATTGAGGGA ACCCGTCAAT GGACTGACCC ACTGTCTTGG CGCTGTCCTT GCGCTGGTGG GGGCCGTGCT GTTGCTTGCC CGCGTGGCGT CGCCCGCCAT GCCGTGGCAC ATCGTCACCT TCGCGGTCTT CGGCACCGCC ATGGTCATGC TCTACACGGC GAGTACGCTC TACCACTGGT TGCCGCTTTC CGAGGCGGGC GTGCGGCTGT GGCGGCGCAT CGACCATTGC ATGATCTTCG TCTACATCGC GGCGACCTAT ACGCCCATAT GCCTCATCCC GTTACGCGGG CCGTGGGGCT GGTCGCTCTT CGGCAGCGTA TGGGCGCTGG CGCTGGCTGG CATCTTCGTG AAGGTGTTCT GGCTGCATGC GCCGCGCTGG CTGTCGACGG GGTTGTACCT CGGCATGGGG TGGATGGTCA TCGTCGGCGT GTACCCGCTG GTGGTGAGCC TGCCCGCCGG GGCGCTGTGG TGGCTGCTGG CGGGAGGCCT GTTCTACACC GTGGGTGCCG TGGTCTATGC CAGCCGCTGG CCCAATGTGG CACGGCATTT CGGCTTTCAT GAGCTGTTCC ACGTGTTCGT CATGGCCGGA AGCTTCTGCC ATTTTCTCGT GATGTACCTG TACGTGAGCA GGCTGTAG
|
Protein sequence | MAVRLREPVN GLTHCLGAVL ALVGAVLLLA RVASPAMPWH IVTFAVFGTA MVMLYTASTL YHWLPLSEAG VRLWRRIDHC MIFVYIAATY TPICLIPLRG PWGWSLFGSV WALALAGIFV KVFWLHAPRW LSTGLYLGMG WMVIVGVYPL VVSLPAGALW WLLAGGLFYT VGAVVYASRW PNVARHFGFH ELFHVFVMAG SFCHFLVMYL YVSRL
|
| |