| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DvMF_3173 |
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| Symbol | |
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| ID | 7175119 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011769 |
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| Strand | - |
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| Start bp | 4001377 |
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| End bp | 4003251 |
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| Gene Length | 1875 bp |
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| Protein Length | 624 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 643541709 |
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| Product | Carboxylyase-related protein |
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| Protein accession | YP_002437577 |
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| Protein GI | 218888256 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0043] 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases |
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| TIGRFAM ID | [TIGR00148] UbiD family decarboxylases |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 72 |
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| Fosmid unclonability p-value | 0.546258 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACCTACC GCAATCTTTC CGCCTGCGTG GCCGACCTTG AGCGCCACAA GCACCTCGTG
CGCATCGACG CAGAGGTGGA CGCCAACCTC GAAATAGCCG CCATCCAGCG CCGCGCCTAC
CGCGCGGGCG CGCCCGCCAT GCTGTTCACG CGGGTAAAGG GCTGCCGGTT TCCCATGCTG
GCCAACCTGT TCGGCACCAT GGAGCGCACG AAGTTCATCT TTCGCGATAC GTTGCGCGCC
GTGGAAGGCA TCTTCCGCCT GAAGCTGGAC CCCTTCGACG CCTTCCGCCA CCCCCTGCGC
TACACCGGCG TGCCGCGCGC CCTGTGGTCC ATGCTGCCCA AATCGGTGTC CGACGGCCCG
GTGCTGCGCC ACCGCTGCGC CATCAGCGAC CTGCCGCGCC TGATCTCGTG GCCCATGGAC
GGTGGCGGCT ACGTCACCCT GCCGCAGGTG TACACCGAAA GCCCCGACGC GCCCGGCCCC
ATGCAGTCCA ACATCGGCAT GTACCGCGTG CAGCTGGACG GCCCTGACTA CGAGAAGGAC
CGCGAGGTGG GCCTGCACTA CCAGATCCAC CGGGGCATCG GGTACCACCA CGCCCAGGCC
CTGCGCCGGG GCGAACCGCT GAAGGTGAAC ATCTTCGTGG GCGGGCCCCC CGCCATGACC
CTGGCCGCCG TCATGCCCCT GCCGGAAGGC CTTGCCGAAA TCCTGTTCGC GGGGGCCATG
GCGGGCTTCC GCATTCCCAT GGTACGCCGC CCTGGCGGGT TGCCCATTCT GGCCGAGGCC
GACTTCTGCA TCAGCGGCAC CATCGCCCCG TACCAGAAGC CGGAAGGCCC CTTCGGCGAC
CACCTTGGCT ACTACAGCCT TGCGCACGAC TTTCCCGTGC TGCGGGTGGA CGCGGTGCAC
CACCGCCCGG ACGCCATCTG GCCGTTCACC ACGGTGGGCC GCCCCCCGCA GGAAGACACC
GTGTTCGGCG ACTTCATCCA CCAGCTTACC GCCGCCCTTG TGCCGCAAGT ATTCGCGGGC
GTCCGCGAAA TCCACGCCGT GGACGCCGCC GGGGTGCACC CCCTGCTGCT GGCCATCGGC
AGCGAGCGCT ACGTGCCCTA CGCCGGTGAA CGCCAGCCGC AGGAACTGAT CACCTGCGGC
ATGGCCCTGC TGGGCTCCAC CCAGACCTCG CTTTCCAAGT ACGTGCTGAT CATGGCCCAC
GAGGATGCGC CCTCCATGTC CACGCACGAC TTCCCCGGCT TCTTCACGCA CATGCTGGAG
CGCACCGACT TCACCCGCGA CCTGCACTTC GTCACCCGCA CCACCATCGA CACCCTGGAT
TACACCGGCA TCAGCCTGAA CCAGGGCTCC AAGCTGGTGT GGGCGGCGGC GGGCCCGCGC
AAGCGGCAAC TGGCCGATAC CCTGCCCGGC GACCTGCCGC TGGATGCTCG ATCGGAAGAT
GGCGGCCTTG CCGCTGCGGG CGGCAGTTTC GGCGATCCGC GCCTGTTCGG CAGGGGCATC
GTGGTGCTGC GCGGGCCGAA ACATACGGCA AGACGCGACG AGCACGACCC GGCCATGCAC
GCCCTGGCCG CACGGTTGGC CCATGCGCAC GGGCTGGACG GCCTGCCCCT GTTCGTGGTG
GTGGACGACC CGGCCTTTAC CGCCGCCAAC TGGGAAAACT TCCTGTGGGT GGTCTTCACC
CGGTCCGACC CGGCCACCGA CATGTACGGC GCGGGCGAAT TCACCCACTG CAAGCACTGG
GGCTGCACCG GCCCGCTGGT CATCGACGCG CGGCTGAAGT CGTTCCACGC CCCGGCGCTG
GAAACCGACC CCGACGTGGA GCGCCGCGTG GATGCGCTGG CCGCACCCGG CGGCCCGCTG
CACGGGTACC TGTAG
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| Protein sequence | MTYRNLSACV ADLERHKHLV RIDAEVDANL EIAAIQRRAY RAGAPAMLFT RVKGCRFPML
ANLFGTMERT KFIFRDTLRA VEGIFRLKLD PFDAFRHPLR YTGVPRALWS MLPKSVSDGP
VLRHRCAISD LPRLISWPMD GGGYVTLPQV YTESPDAPGP MQSNIGMYRV QLDGPDYEKD
REVGLHYQIH RGIGYHHAQA LRRGEPLKVN IFVGGPPAMT LAAVMPLPEG LAEILFAGAM
AGFRIPMVRR PGGLPILAEA DFCISGTIAP YQKPEGPFGD HLGYYSLAHD FPVLRVDAVH
HRPDAIWPFT TVGRPPQEDT VFGDFIHQLT AALVPQVFAG VREIHAVDAA GVHPLLLAIG
SERYVPYAGE RQPQELITCG MALLGSTQTS LSKYVLIMAH EDAPSMSTHD FPGFFTHMLE
RTDFTRDLHF VTRTTIDTLD YTGISLNQGS KLVWAAAGPR KRQLADTLPG DLPLDARSED
GGLAAAGGSF GDPRLFGRGI VVLRGPKHTA RRDEHDPAMH ALAARLAHAH GLDGLPLFVV
VDDPAFTAAN WENFLWVVFT RSDPATDMYG AGEFTHCKHW GCTGPLVIDA RLKSFHAPAL
ETDPDVERRV DALAAPGGPL HGYL
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