| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DvMF_2675 |
|---|
| Symbol | |
|---|
| ID | 7174613 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011769 |
|---|
| Strand | + |
|---|
| Start bp | 3378099 |
|---|
| End bp | 3378953 |
|---|
| Gene Length | 855 bp |
|---|
| Protein Length | 284 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 643541207 |
|---|
| Product | HflC protein |
|---|
| Protein accession | YP_002437082 |
|---|
| Protein GI | 218887761 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0330] Membrane protease subunits, stomatin/prohibitin homologs |
|---|
| TIGRFAM ID | [TIGR01932] HflC protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 60 |
|---|
| Fosmid unclonability p-value | 0.0148023 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAACGCC GTACCATAAC CATACTTATC GCCCTTGCCG CGCTGCTGGT CATGGGCAGC
CAGTGCATCT ACAGCGTGCA CCAGACCCAG AAGGCCATCG TGTTGCAGCT GGGCGAACCC
GTCGGCGGCG TGGTGCTGCC CGGCTTGCAC TTCAAGCTGC CGTTCATCCA GAACGTGGTG
TACTTCGACG CGCGCATCCT GGACTACGAC GCCCGCTCGG CAGAGGCCCT GACCAGCGAC
AAGAAGGCCA TCGTGCTGGA CAACTACGCC CGCTGGCGCA TCACCGACCC GCTGACCTTC
TACCGCAACG TGCGTACCAT TCCCGGTGCC CAGGCCCGCC TGGACGACAC CGTGTATTCG
CAGCTGCGCG TCTTCGTGGG GCGCAATACC CTGACCGAGG TGGTCTCGTC CAAGCGCGCC
GAGATCATGG GGGCGGTGAC GGCCCGCACC TCCGAGCTGC TGCGCGAGTA CGGCATGGAG
ATCATTGACG TGCGCATCAA GCGCACCGAC CTGCCCACGG AGAACCAGCG TGCCATTTTC
GGGCGCATGC GTGCCGAGCG CGAGCGCCAG GCCAAGCAGT ACCGTTCGGA AGGCCAGGAG
GAATCGACCA AGATTCGCTC TGCCGCCGAC CGCGAGCGCA CCGTGCTGAT GGCCGAAGCC
ACCCGCAAGT CCGAGATGCT GCGGGGCGAA GGCGACGCTG ACGCCGCCCG GATATTCTCC
GAGGCGCTTT CGCAGTCACC GGAATTCTAC GACTTCCAGC GCAGCCTGGA TGCCTACCGC
AAGGTGTTCC GTGACAATAC GCGTGTCATT CTCACCCCCA GCGATCCCTT CCTGAAACAG
TTCCAGGGTC GGTAG
|
|---|
| Protein sequence | MERRTITILI ALAALLVMGS QCIYSVHQTQ KAIVLQLGEP VGGVVLPGLH FKLPFIQNVV
YFDARILDYD ARSAEALTSD KKAIVLDNYA RWRITDPLTF YRNVRTIPGA QARLDDTVYS
QLRVFVGRNT LTEVVSSKRA EIMGAVTART SELLREYGME IIDVRIKRTD LPTENQRAIF
GRMRAERERQ AKQYRSEGQE ESTKIRSAAD RERTVLMAEA TRKSEMLRGE GDADAARIFS
EALSQSPEFY DFQRSLDAYR KVFRDNTRVI LTPSDPFLKQ FQGR
|
|---|
| |