| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DvMF_2651 |
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| Symbol | |
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| ID | 7174589 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011769 |
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| Strand | + |
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| Start bp | 3352099 |
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| End bp | 3353250 |
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| Gene Length | 1152 bp |
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| Protein Length | 383 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 643541183 |
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| Product | dihydrouridine synthase DuS |
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| Protein accession | YP_002437058 |
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| Protein GI | 218887737 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0042] tRNA-dihydrouridine synthase |
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| TIGRFAM ID | [TIGR00737] putative TIM-barrel protein, nifR3 family |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 87 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCCTGC CCGGTGCCCT GCCCGGCCCC CCCCCCGGCA CCGTTCTCGA AACCGCCTCC
GACACCGTTC CCGCGGGTGA TGCGGCCCTT GCCGCGCGCC TGCGCCAGCC GCTGACCGTG
GGCGGGCGCA CCGTGCCGGG GCGGCTGTGG CTGGCCCCCA TGGCCGGGCT GGGCCACGCC
GCCTTCCGCG AGGTGGTGGA AGACTACGGC GGCTGCGGCC TGCTGTTCAC CGGCATGTGC
AACGCCCGCG CCGTGCCCAC GGAGCGTCCG GAAAAGTCCG AGGCGTTCTC GTGGCGCGCG
GGCGAGCCGC CCCGGCTGGT CTGCCAGCTG TTCGGGGCGG AGCCGGAGCA CATGGCCGAG
GGTGCGCGCC GGGTGCAGGC CGAAGGCTTT TTCGGCGTGG ACCTGAACAT GGGCTGCTCG
GTGTCCGCCA TCATCAAGCG CGGCTGCGGC GCGGACCTGC TGCGCGACCC GGAGCGCGCC
GTGCGCATGG TGGCGGCGGT GCGCCGCGCC GTGGACATCC CGGTGTTCGT CAAGTTCCGC
ACCGGCTGGT CGCCGGACCC GCAGCCCGCC GTGGATCTGG CCCGCCGCTT CGAGGACGCC
GGGGCCGACT GCCTGGTCTT TCACCCCCGC GTGGCTCCGG ACCGGCGCAC CCAGCCGCCC
CGGCGCGCCC ACATCGGGCT GGTCAAGGCG GCGGTGTCCA TCCCGGTCAT GGGCAACGGC
GACGTGTTCA CGCCGGAGGA CTGCGCCAAC CTGCTGGACG ACACCGGCTG CGACGGCGTG
TCGCTGGGGC GCATCGCCGT GGCCCGGCCA TGGGTGTTCG CGGCTTGGAC TGGCATGGTG
GACGACGACC CGGACCGCAA CCCCGCCCCG TGGCGCGAAG CTCCGCTGGC CCTGCTGGAC
GCGCTGGCCC GGCGGCACGG TCCGGCACGC GCGGTGCGCA TGTTCGGAAA GTTCCTGGTC
TACATCACCG GCAACTTCAC CTACGGCAAC GGGCTGCGCG GGCGGCTGCT GCGGGTGACG
GGCCGGACGC CCGCGTCTTT TGGAGCGGAC GATCCCGGCG GCCTGCGCGC GTTGCAGGAT
GCCCTGAGGG CCGAACTGGA CCCGCTGCCC GCCGTGCTGC GTCGCCCCAG CGCGCTGCTG
TTCGGCATGT AG
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| Protein sequence | MPLPGALPGP PPGTVLETAS DTVPAGDAAL AARLRQPLTV GGRTVPGRLW LAPMAGLGHA
AFREVVEDYG GCGLLFTGMC NARAVPTERP EKSEAFSWRA GEPPRLVCQL FGAEPEHMAE
GARRVQAEGF FGVDLNMGCS VSAIIKRGCG ADLLRDPERA VRMVAAVRRA VDIPVFVKFR
TGWSPDPQPA VDLARRFEDA GADCLVFHPR VAPDRRTQPP RRAHIGLVKA AVSIPVMGNG
DVFTPEDCAN LLDDTGCDGV SLGRIAVARP WVFAAWTGMV DDDPDRNPAP WREAPLALLD
ALARRHGPAR AVRMFGKFLV YITGNFTYGN GLRGRLLRVT GRTPASFGAD DPGGLRALQD
ALRAELDPLP AVLRRPSALL FGM
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