Gene DvMF_2449 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvMF_2449 
Symbol 
ID7174384 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris str. 'Miyazaki F' 
KingdomBacteria 
Replicon accessionNC_011769 
Strand+ 
Start bp3083870 
End bp3084880 
Gene Length1011 bp 
Protein Length336 aa 
Translation table11 
GC content70% 
IMG OID643540980 
Productformamidopyrimidine-DNA glycosylase 
Protein accessionYP_002436858 
Protein GI218887537 
COG category[L] Replication, recombination and repair 
COG ID[COG0266] Formamidopyrimidine-DNA glycosylase 
TIGRFAM ID[TIGR00577] formamidopyrimidine-DNA glycosylase (fpg) 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones97 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTGAGT TGCCAGAGGT GGAGACCATT GCCTGCGGTT TGCGGCCCCA GTTGACGGGG 
CGGCGCATCG TGTCCGTTTT GGTGCGCAAC GAAGGGACGG TGCAGGGCGA CGCAGCGGCG 
TTCGCCCGGT GCGTGCCGGG GCGTGTCATT GCCGGGGTGG GGCGGCGCGG CAAGTTGCTG 
CTGATGGAAT TGGCCCCACC GGGCGGACCG GACGCCCCGG ATGCCACAGG CGGTGGAGCG 
GGCGGGCCGG ATGCGGCAGG GGCCGCCGGG ACGGGAACCA ATGTTCCGCC AGACGCGGCA 
GACCTGATGG CCTGCCGCGA CGCGGCGGGC AAGATGGCCG GTTCCAGCGC TACAGGCGCT 
ACAGGCGCGG CGGGCGGCAA CCGCGTGCCG CATCTGCTGG GCGTGCATCT GAAGATGACC 
GGGCGGCTGT TTGTCTACGG GCCGGAGGTG GCGCCCAACA CCCACACCCG CGTGGTCTTC 
GGGCTGGATG ACGGCAATCG GCTGTTTTTC GACGATGCGC GCAAGTTCGG TTACGTGCGC 
GCCCTGTCCG ACGCCGATCT GGCCACGTGG GACTTCTGGC GGTCGCTGGG GCCGGAGCCG 
CTGGAGATTG CCGCGCCGGA CTTCGCGGCG CTGTTCCGGG GGCGGCGGGG GCGCATCAAG 
GCGCTGTTGC TGGACCAGAC GGTCATCGCG GGCATCGGCA ACATTTACGC CGACGAATCG 
CTGTTCCGGG CGTCCATCCG GCCCGATGCG CAGGCCGGGG AGCTTTCGCC CGAGCGGCTG 
TGCGTGTTGC ACGGGCATCT GGTGGACGTG CTGCGCGAAT CCATCGCCGA GTGCGGCAGT 
TCCATCCGCG ACTACCGCGA TGCCCACGGC GATGCCGGGG CCTTCCAGAA CCGCTTCCGG 
GTGTACGGCA GGTCCGGGCA GCCGTGCGTG GCCTGCGGGC GCGCGCTGAC CACGGGCAAG 
GTGGCCGGGC GCACCACGGT GTTCTGCGAG CGCTGCCAGA AGGCGAAGTG A
 
Protein sequence
MPELPEVETI ACGLRPQLTG RRIVSVLVRN EGTVQGDAAA FARCVPGRVI AGVGRRGKLL 
LMELAPPGGP DAPDATGGGA GGPDAAGAAG TGTNVPPDAA DLMACRDAAG KMAGSSATGA 
TGAAGGNRVP HLLGVHLKMT GRLFVYGPEV APNTHTRVVF GLDDGNRLFF DDARKFGYVR 
ALSDADLATW DFWRSLGPEP LEIAAPDFAA LFRGRRGRIK ALLLDQTVIA GIGNIYADES 
LFRASIRPDA QAGELSPERL CVLHGHLVDV LRESIAECGS SIRDYRDAHG DAGAFQNRFR 
VYGRSGQPCV ACGRALTTGK VAGRTTVFCE RCQKAK