| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DvMF_2306 |
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| Symbol | |
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| ID | 7174239 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011769 |
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| Strand | + |
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| Start bp | 2896618 |
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| End bp | 2899854 |
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| Gene Length | 3237 bp |
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| Protein Length | 1078 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 643540835 |
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| Product | carbamoyl-phosphate synthase, large subunit |
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| Protein accession | YP_002436715 |
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| Protein GI | 218887394 |
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| COG category | [E] Amino acid transport and metabolism
[F] Nucleotide transport and metabolism |
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| COG ID | [COG0458] Carbamoylphosphate synthase large subunit (split gene in MJ) |
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| TIGRFAM ID | [TIGR01369] carbamoyl-phosphate synthase, large subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 82 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCAAAC GCACCGATTT GAAGCGGATC ATGGTCATCG GTTCCGGCCC GATCGTCATC
GGGCAGGCGT GCGAATTCGA CTATTCCGGC ACGCAGGCCG TGAAGGCCCT GAAGGAAGAA
GGCTACGAGG TGGTGTTGGT CAACTCCAAC CCCGCCACCA TCATGACCGA CCCCGGTCTT
GCCGACCGCA CCTACATCGA ACCCATCGAG CCCGAAACGG TGGCCGCCAT CATCCGCAAG
GAGCGGCCCG ACGCGCTGCT GCCCACCCTG GGCGGCCAGA CCGGCCTGAA CACCGCGCTG
GCCCTTGCCG CCATGGGCGT GCTGGAAGAA TGCGGCGTTG ACCTCATCGG GGCCAACAAG
CAGGTCATCG AAAAGGCGGA AAGCCGCGAA CTCTTCCGCG AGGCCATGGC CAACATCGGC
CTGAAGGTGC CCGCCAGCGG CATTGCCCGC ACCATGGAAG ACGTGCGCCG CCTGGGCACC
GAAATGCCCT TCCCGCTGAT CATCCGCCCG GCCTTCACCA TGGGCGGCAC CGGCGGCGGC
ATCGCCTACA ACATGGAGGA CCTGGAAGAG ATCGCCGCGC GCGGTCTTGC CGCCTCCATC
AAGCACGAGG TGATGATCGA GCAGTCGGTG CTGGGCTGGA AGGAATTCGA GATGGAGGTG
ATGCGCGACA AGGCCGACAA CTGCGTCATC ATCTGCTCCA TCGAAAACTT CGACCCCATG
GGCGTGCACA CGGGCGATTC CATCACCGTG GCCCCGGCGC AGACCCTGAC CGACGTCGAG
TACCAGATGA TGCGCGATGC CTCCATCGCC ATCATGCGCG AAATCGGCGT GGAAACGGGC
GGCTCCAACG TGCAGTTCGG CATCAACCCG CAGAACGGCG ACATGGTGGT CATCGAGATG
AACCCCCGCG TGTCGCGTTC TTCCGCGCTG GCCTCCAAGG CCACCGGGTT CCCCATCGCC
AAGATCGCGG CCAAGCTGGC CGTGGGCTAC ACGCTGGACG AAATTCCCAA CGACATCACC
CGCGAGACGA TGGCCAGCTT CGAGCCGTCC ATCGACTACT GCGTCACCAA GATTCCGCGC
TTCACCTTCG AAAAGTTCCC CGGCGCCAAG GACGAGCTGA CCACCTCGAT GAAGAGCGTG
GGCGAGGCCA TGTCCATTGG CCGCACCTTC AAGGAATCGT TGCAGAAGGG CCTGCGCTCG
CTGGAAGTGG GCGCGCCCGG CCTTGGTTCC GCCTTCCGCT GCAAGGGGCC GGAGCGCGAG
GACATCATGC GCAAGCTGCG CACGCCCAAC TCGCGCCGCA TCTTCTACGT GCGGCACGCC
ATGCTCGACG GCATGACCGT GGAGGAAATC CACGAGGCCA CCGCCATCGA CCCGTGGTTC
CTGCGCCAGA TGAAGGACCT GGTCGACATG GAAGCCGAGC TGCGCGACTT TGCCCTGGGC
AACGCCATGA CCGTGGACAA CGCGGAACTG GTGGCCCTGA TGCGCCGCGC CAAGGAATAC
GGCTTTTCCG ACCGCCAGCT GGCCGAAATG TGGAAGCGCC CCGAATCGGA CGTGCGCACC
CTGCGCAAGC AGATGGGCAT CGCCCCCACC TACTATCTGG TGGACACCTG CGCCAGCGAG
TTCGAGGCGT ACACCCCTTA CTACTACTCC ACCTACGAGA CCGGCCATGA AGTGGCCGTG
GAAGACCGCA AGAAGGTCAT CATTCTGGGT GGCGGGCCCA ACCGCATCGG CCAGGGCATC
GAGTTCGACT ACTGCTGCTG CCACGCCTCC TTCGCGCTGA AGGAAATGGG CGTGCAGGCC
ATCATGGTCA ACTCCAACCC CGAAACGGTA TCGACCGACT ACGACACCTC CGACCGCCTG
TACTTCGAGC CGCTGACCTT CGAGGATGTC ATGAACATCA TCGAGACGGA AAAGCCCGAC
GGCGTGGTGG TGCAGTTCGG CGGGCAGACC CCGCTGAACC TGGCCGTGCC GCTGATGCGC
GCTGGCGTGC CCATTCTTGG CACCTCGCCC GATTCCATCG ACCGCGCCGA AGACCGCGAA
CGCTTCCAGG CCCTGTTGCA GAAGCTGGGC CTGCGCCAGC CCGCCAACGC CACGGTCATG
TCACTGCCCG AGGCGCGCAG CGCCGCCGCC CGCATCGGGT ACCCGACGGT GGTGCGGCCC
AGCTACGTGC TGGGTGGCCG GGCCATGGAG ATCGTGTACG ACGAGGAGCA ACTGGCAGAG
TACTTCGCCA ATTCGGTGGG TGAAAAGCCC AAGCACCCCA TCCTCATCGA CAAGTTCCTG
GAAAGCGCCA TCGAGGTGGA CGTGGACGCC CTGTCCGACG GCACCGACGT GTACGTGGCG
GGCATCATGG AACACATCGA GGAGGCGGGC ATCCACTCCG GCGACTCCGC CTGCGTCATT
CCGCCGCACA CACTGCCCGA GGCCATCGTC AACGAGATTG CCCGGCAGAC CGTGGAACTG
GCGCGCGAAC TGCGCGTGGT GGGCCTGATG AACATCCAGT TCGCGGTCAA GGACGGCCTC
ATCTACATCC TTGAAGTGAA CCCCCGCGCC TCGCGCACCG CGCCCTTCGT GTCCAAGGCC
ACGGCGGTGC CCCTGCCGCG CCTGGCCACC CAGATAATGC TGGGGGCCAC GCTGAAGGAA
CTGGACCCGT GGTCCATGCG CCGCACCGGC TACTTCTCGG TGAAGGAATC GGTGTTCCCG
TTCAACCGCT TCCCGGGGGT GGACATCCTG CTCGGCCCTG AAATGCGGTC CACGGGCGAG
GTGATGGGTA TTGCCTCCAG CTTCGAGGAA GCCTATCTGA AGGGCCAGCT TGCAGGCGGG
CAGCGTCTGC CGCAGAGCGG CAAGATATTC ATCTCCGTCA ACGACCGCGA CAAGCTGCTG
ATTACGGAAG TGGCCAGCAT GTTCGCGGAC CTCGGCTTCG AGGTGCTGGC CACCAGCGGC
ACCGCCAAGC TGCTGCGCGA AGGCGGCGTG CCCGCCACGT CGGTACACAA GGTGTACGAG
GGAAGGCCCA ACATCGTGGA CTTCATCAAG AACGGCGATA TCGCCCTGGT GCTCAACACC
GCCTCGGGCA AGCGCACCGT GCAGGATTCC AAGTCCATCC GGCAGGCCAC GCTGATGTAC
GGGGTGCCCT ACAGCACCAC CGTATCCGGC GCCAAGGCCA TCGCGCAGGC CATACGGGCC
AGCCGCTGCT GCGGGGTGAA CGTGAAGAGC TTGCAGGAAT ACTACGGAAC CAACTAG
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| Protein sequence | MPKRTDLKRI MVIGSGPIVI GQACEFDYSG TQAVKALKEE GYEVVLVNSN PATIMTDPGL
ADRTYIEPIE PETVAAIIRK ERPDALLPTL GGQTGLNTAL ALAAMGVLEE CGVDLIGANK
QVIEKAESRE LFREAMANIG LKVPASGIAR TMEDVRRLGT EMPFPLIIRP AFTMGGTGGG
IAYNMEDLEE IAARGLAASI KHEVMIEQSV LGWKEFEMEV MRDKADNCVI ICSIENFDPM
GVHTGDSITV APAQTLTDVE YQMMRDASIA IMREIGVETG GSNVQFGINP QNGDMVVIEM
NPRVSRSSAL ASKATGFPIA KIAAKLAVGY TLDEIPNDIT RETMASFEPS IDYCVTKIPR
FTFEKFPGAK DELTTSMKSV GEAMSIGRTF KESLQKGLRS LEVGAPGLGS AFRCKGPERE
DIMRKLRTPN SRRIFYVRHA MLDGMTVEEI HEATAIDPWF LRQMKDLVDM EAELRDFALG
NAMTVDNAEL VALMRRAKEY GFSDRQLAEM WKRPESDVRT LRKQMGIAPT YYLVDTCASE
FEAYTPYYYS TYETGHEVAV EDRKKVIILG GGPNRIGQGI EFDYCCCHAS FALKEMGVQA
IMVNSNPETV STDYDTSDRL YFEPLTFEDV MNIIETEKPD GVVVQFGGQT PLNLAVPLMR
AGVPILGTSP DSIDRAEDRE RFQALLQKLG LRQPANATVM SLPEARSAAA RIGYPTVVRP
SYVLGGRAME IVYDEEQLAE YFANSVGEKP KHPILIDKFL ESAIEVDVDA LSDGTDVYVA
GIMEHIEEAG IHSGDSACVI PPHTLPEAIV NEIARQTVEL ARELRVVGLM NIQFAVKDGL
IYILEVNPRA SRTAPFVSKA TAVPLPRLAT QIMLGATLKE LDPWSMRRTG YFSVKESVFP
FNRFPGVDIL LGPEMRSTGE VMGIASSFEE AYLKGQLAGG QRLPQSGKIF ISVNDRDKLL
ITEVASMFAD LGFEVLATSG TAKLLREGGV PATSVHKVYE GRPNIVDFIK NGDIALVLNT
ASGKRTVQDS KSIRQATLMY GVPYSTTVSG AKAIAQAIRA SRCCGVNVKS LQEYYGTN
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