| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DvMF_2287 |
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| Symbol | |
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| ID | 7174220 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011769 |
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| Strand | + |
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| Start bp | 2874551 |
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| End bp | 2876170 |
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| Gene Length | 1620 bp |
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| Protein Length | 539 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 643540817 |
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| Product | flagellar M-ring protein FliF |
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| Protein accession | YP_002436697 |
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| Protein GI | 218887376 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1766] Flagellar biosynthesis/type III secretory pathway lipoprotein |
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| TIGRFAM ID | [TIGR00206] flagellar basal-body M-ring protein/flagellar hook-basal body protein (fliF) |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 76 |
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| Fosmid unclonability p-value | 0.890637 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTCCCG CTCTCGCAGA CGTCATCCAG AAGGCCAAGG GCTTCTGGGA ACGCATCTCC
ATCTCGCAGC GCATCTTCAT CGCCGGTCTG GCCGTGGCGG TGGTGGCCGT GTTCTTCGGC
CTGGTTTTCT GGATGAACCG TCCCGACTAC CGGGTGTTGT ACTCCAACCT GTCGCCCGAG
GACGCCAGCC GCGTGGTCAA GCTGTTGCAG GCCGACAAGG TGGCCTACAA GCTGGAGAGC
GGCGGCTCGT CCATCACCGT GCCCGCCGAC AAGGTGTACG ACCTGCGGCT GAAGGTGGCC
GGTGAAGGCA ATCTGGTGGG CCAGGGCATC GGCTTCGAGA TTTTCGACCA GGTCAAGGTG
GGCCAGACCG ACTTCGTCCA GAAGATCAAC TACCAGCGCG CCCTGCAGGG CGAACTTTCG
CGCACCATTT CGGAATTTCC CAACGTGGAG AGCGCGAGGG TGCACCTGGT CATTCCGCAC
CGCAGCCTGT TCATCGAGGA ACAGCAGAAG CCGTCCGTCT CGGTGGTGCT GAAGCTGCGC
GACAGCAGCA AGAAGCTGGA GTCCAAGGAC GTGCAGGCCA TCGTCAATCT GGTGGTCATG
GCCGTGGAAG GGCTGGACAA GTACAAGGTG TCCATCGCCG ACACCACCGG CAAGATCCTG
TACGCCCCGG ACGAGGACGG CAGCATCACC GGCATGACCA CCACCCAGCT CGACCACAAG
CTGCGCATGC AGCAGACCCT GGAGCGGCGC ATAGAAGAGC TGCTCTACCC GGTGCTGGGC
GCGGGCAAGA TCATCGCCAA GGTCAACGCC GACCTCGACT TCAGCCAGCG CACCATCCGC
AAGGAACTGT ACGACCCCGA AAAGACCGTG GTGCGCAGCG AACAGCGCAG CGAAGAATCG
CAGCGCGGCC GTTCCAACCT CGAAGCCGGT TCGCCCGACG CCAATTTCCG GGGCGATTCG
CCCACGGGCG GCGCGTCCAC CCAGGAAGGC AACCGCGAAA CCCGCACCAC CAACTACGAA
ATCAACAAGG AAGAACAGAA TATCGTTGCC CAGGTGGGCG ACATTTCCCG CCTGACCGTT
GCGGTGATCG TGGACGGCAC GTATGAGAAG GGGGCGGACG GACAGTGGGC CTTCGTTCCC
CGCAAGGCCG AAGATGTCGA GCGCATTCGC CAGCTGGTGG CCAATGCCGT GGGGTACGAC
CGCGCGCGCG GCGACACCAT AGAGGTCAGC AGCATTTCGT TCGGCGGGCC GGACGTGCCG
CAGGAATCAA GCCTGCCCCA GCTGGTCATG GACTACGCCC TGCGCCTTGG CAAGCCGCTG
CTCAACGCCC TGCTGGTCTT CCTGTTCCTG GTGCTGGTGG TGCGCCCGGT GGTGCTCGCC
ATGATCCGTC CCCGCGTGGA GGGAGAGATG ATCGAAGGGT TGGAAGGTCT GCCCGAAGGT
GAAGAGCGTC TTGCGCTCAT CGAGGGCGAC GAGGAAGTGG ACGCGCTGGA CGCGTTGAAG
AAGATCGAGG ACATCAAGGC TCACGCCCTG CAAATGGCCG AACAGAACAT GGATCAGGCC
GTAAGCATCA TCAGGAGCTG GTTGAAGCAT GGCGACGGAC CAAAGGTTGG AGCAGCTTAA
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| Protein sequence | MAPALADVIQ KAKGFWERIS ISQRIFIAGL AVAVVAVFFG LVFWMNRPDY RVLYSNLSPE
DASRVVKLLQ ADKVAYKLES GGSSITVPAD KVYDLRLKVA GEGNLVGQGI GFEIFDQVKV
GQTDFVQKIN YQRALQGELS RTISEFPNVE SARVHLVIPH RSLFIEEQQK PSVSVVLKLR
DSSKKLESKD VQAIVNLVVM AVEGLDKYKV SIADTTGKIL YAPDEDGSIT GMTTTQLDHK
LRMQQTLERR IEELLYPVLG AGKIIAKVNA DLDFSQRTIR KELYDPEKTV VRSEQRSEES
QRGRSNLEAG SPDANFRGDS PTGGASTQEG NRETRTTNYE INKEEQNIVA QVGDISRLTV
AVIVDGTYEK GADGQWAFVP RKAEDVERIR QLVANAVGYD RARGDTIEVS SISFGGPDVP
QESSLPQLVM DYALRLGKPL LNALLVFLFL VLVVRPVVLA MIRPRVEGEM IEGLEGLPEG
EERLALIEGD EEVDALDALK KIEDIKAHAL QMAEQNMDQA VSIIRSWLKH GDGPKVGAA
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