| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DvMF_2058 |
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| Symbol | |
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| ID | 7173977 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011769 |
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| Strand | - |
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| Start bp | 2549908 |
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| End bp | 2555493 |
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| Gene Length | 5586 bp |
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| Protein Length | 1861 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 643540575 |
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| Product | putative superfamily I DNA and RNA helicase protein |
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| Protein accession | YP_002436469 |
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| Protein GI | 218887148 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1112] Superfamily I DNA and RNA helicases and helicase subunits |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 73 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCACAG ACTGGGCTTT GCATGCGGAC AGCGATAGTA ATTCGGTGTT TCAGGGCAAC
TTGCCTCTGG TTGAAAAGCT TGAGCGTGCC AGGGTGGAAT TGCTCGATTT ATCGGCCAGG
AACCGTCTGC TCAACATGCC TCGTTCCGGA AAGAGCGCGA GGACTATCGA GATCGTGGAT
GAGAAGAGTG CTCAAATTTT CAGATTGCTC GTTCGCGAAG GTAAGCCATT TACGTTCGTT
GCCGGTAAAT CGGCACGCAC AGAAGAAGCT GAGGGGGATG CCGAAACATA CGAAATTACG
GATCTTGCGC AACCAGATGA TGATATTGCG GATGATCGGG GTGTTTTCAG TCGCCATGTC
GACACCCGGC TTCAGACTCG GTTGACCCCG CAGGGCCTTC AGAAACGGTT GCTCGAACTT
TATTTCGATG CCCGGACACT GGAGGAAGAG CAAGGCGTCA ACATTCTTTA CCTTACATTG
GGTACACTCA AGTGGGTCGA CCCGGCTAAC GCCGCTAACA CCAGATATGC CCCACTGTTA
TTGATCCCCG TTTTGCTGGA TCGCGGCAAC GCCGCTGAGA AATTCAAGCT TCGGGTTCGG
CAGGAGGATT TTGCTTCCAA CCTGTCGCTC GAAACCTTCC TTGACCGTGT TCACGGTATT
TGCTTGCCAG CGTTTGAGGC AACGGACTCA TTTGAACCAA TTTCATATTT TGAAGGCATT
GCGGATGCCG TGGCAGGAAA GCCGGACTGG GCAGTGCAGA CTGACGATAT CGCACTGGGT
TTTTTCTCGT TCGCCAAGTT CTTGATGTAC CGTGATCTTG ATCCGGAAAC ATGGCCCGCC
CATGCACGGA TAAGCGACAG ACCCCTGATT CGTTGCGCTC TCGCCGATGG CTTCACGGGT
TCCGACGGCA TGATTCCTGA AGACGCCAAG ATCGATCCTT TCATCCCCCC TTCGGAAATG
CTGCACATCG TGGACAGCGA CAGCAGCCAG GCCTTGGCCG TCCACGAGGT TCGGCGCGGG
CGTGACATGG TGATTCAGGG GCCTCCCGGA ACCGGCAAAA GCCAGACGAT CGCCAACATC
ATCGCCGCTG CTATCGCCGA CGGAAAGACA GTTCTTTTCG TTGCGGAAAA AATGGCTGCG
CTAGAGGTGG TGAAGCGTCG GCTTGATGCC ACCGGGGTGG GTGATGCCTG CCTTGAGTTG
CACAGCAACA AGGCGAACAA ACGAGCCTTG CTTGATGAAC TGCGGCGCAC ATGGCACCTG
GGTGCGCCAA AAATTCAGGA TGCTGGTACC CTGTACACCA GGCTGGCGGA ACTGCGTGAC
GGCCTGAACG CCCATGCCGC AAGGCTGCAT TGCTGCCATA CTACAGCGGG GCTCAGTGCG
TATCAGGTAA TCGGGCAACT TGTTCGGTTG CGGCAGGCTG GCGAACGCCC CAATGACATC
GTGCTTGAGA CGCCGGGTGG ATGGACCGTC GACGGATATG CGGAGCGGCA TGCGGTGCTC
GCCGAACTTG CGGAGCGCGT GAAAGAGATC GGAAAGCCGT CCGAGCATGT CTGGAGTGGC
GTCGGGCTTG CCTCGATAAC TCCGATGGAG GTGGAGCGGT TTACAGGGCG TTTTGCTTCC
TTGGCGGAGC GTCTGGAGGC GCTTGATGCG AAGCAGGCCG ACATGGCCAC CATGTTGGAA
TGTGAACGCG CTGCAACTCT TGATGCCCTT TTGCCCTCCA TCGAAACAGC GGCCCGGATT
GCCGGTGCGC CGGAGCTTTC CGAGAGCGCG CTTTCCTCCT CTGCGTGGCA GGAAGAATAT
GATGCCATCA GCGCGTTGTT GGTGAACGGC AAGCGGTACG CCCAGTTGAA GGCAGAACTG
GCAACCGTTT TTACCCAGGC GGCGTGGGAA ACGGATACGG GTGCTGCACG CGCCACGTTG
GCCCGGTTGC CACATTCCTT CTCGCTGGCC GCCTTTGATC GGTTGGTGGT CCTGGTTGAT
CGGCTCCCGC AATTGACCGC AGAGGCAGAG GCTTTGGCCA GGGCGATGGG GCGTCCTGCG
CCGTTGGCTC TTGCTGATGT CTTGCGCCTC GTGAAGATTG GCGAACGCGT TCTGGCTGCA
CCGTCCTCCA ACTGTGAAGC GTTCGCGGCG GATGCGTGGG ATGGCAATGC AGGACGTGCA
AAAGACTTGG CTGGCGCAGC ACTCACCCTT GAACAAGTCC GATCCGAAAT CGGCGAATCC
ATTTCCGATG CGGCGTGGGG CATGGATTTG TCTGCCATGC GTACGACCCT TGCTGCGCAC
GGCACAGGTT TCTTCAAAAT ATTCAGTGGG GAGTGGAGGC GGGCCAACCG AATTGTCCGA
TCCATCCTTG TGCAGCCCGA ACAGCCTTTG CCGGCAACGC TGACGCAGTT GGATGCCCTT
GCGCGGGGAC AGGCGGCAAA GCGCCTGCTT GAGGCTGAGG ATGCTTTGGG CAAAAGCCTT
TTTGCAGCGG ATTGGCGGCA GGATCGTTCA GATTCCGGTC CACTGTTGGC ACTTGTGGAG
TGGATGCAAT CCGTCGAAGG GTTTGGCGCA GAACCTCGGA CCGTAGTGGC TGCAAACCCC
GACCGTGATG TCATCGCGCG GCATGTTGTG GGCACGGAAA GGCTTTTGGC CGAACTGGTT
AATATTGTTG CCCAGATATG GAGCGAATTG CCCGAACCTG CTGTTGTGTT TGGTGAGACT
CCGACGGCGG AACGCGGAAG TATCGCCCAA TTATTGTCCG CTGCCGTTTC GTTTACGGGT
GCTGCCCGTG AAACGGAGGC GCTCTTCACG GCGGTTCCTG CATCGCTTTC CGACCGTCTC
GCCATGCTGG AAAGGCTTGC CGAGGGGCAG GCATGCGCGG CGTCTCTTGC CGCAGGGGAT
GCCTTAGGGC GCACGGCATT TGGAACACGC TGGGCTGGCA AAGCTTCCGC CTGGCATGAG
CTAGAGGGTG CCGCCACATG GATTGCCGCC AATGGCGACA TCCGGTTGCT GGCGAGCCGC
GTGGCGGATC GTGGACAGCT TGCCGTGCAG GCCGAGGCCA TCAAGGCCGA ACGCGCCACC
CTGATTGCCG ATACCGCAAG CCTCCTGGAG GACATTCATT TGGCTTCCAG ACGGGAGTAC
GAAGCCTCGC AGATTGGTAC AGTTCCCATT GAGCGGTTGT TGGTCAGCCT TGGCGAGTGG
GCGGCAAGTG GAGAACAGCT TTTCAAGTGG GTTGCCTATC GTGACCGCGC CGACCGTGGC
AGGGCGCTCG GTTGCGGCGA TGTCGTCATG CGACTTGAGG ATGGTAGGCT AACGCCAAGC
GAGGTGCTGC CAGCTTTCGA GATGGCGTAT TACGAAGCCA TCTATGCGGA ACTGGTGCGT
AGTGACCCTG ATTTGGGCCG ATTTGACGGC ACGCTGCACG GGCGGCTCGT GCGCGACTTT
GTCGATCTGG ACCGGCAGCG GATTGCCCTT GCCGGAGTGG AGGTAGTCCA GGCGCACCAC
AAGCGTGTTC CCCCTCGTGA TGGTTCGGCC ATTGGGCCAC TGGGGGTGCT ACGCGCCGAG
ATGCAGAAGA AGCGCGGGCA TATGCCCATT CGCAAGCTGA TGGAGCGGGC CGGGCAGGCC
GTTCAGGCGC TCAAGCCAGT ATTCATGATG AGTCCGCTCT CTGTCGCGCA GTTCCTTGCT
CCGGGCGTGT TCGAGTTCGA CCTTTTGGTG ATGGACGAAG CAAGCCAGAT CCAGCCGGTG
GACGCACTTG GTGCCATTGC CCGTGCAAGG CAGGTGGTAG TGGTAGGTGA CCCTAAACAA
CTCCCCCCTA CGGCCTTCTT TTCAAAGATA ACGGGCAACG GGAGTGAGGA CGATGACAGT
GACGGCGGGC GTGTGGCCGA TATCGAGAGC ATTCTCGGCT TGTTTACCGC GCGCGGCCTC
CCGACGCGAA TGCTGCGCTG GCATTACCGC AGCAAACACC AATCACTGAT TGCGGTCAGC
AACCGCCAGT TTTACGAAGG TAAGCTGTTC ATCGTTCCAA GTCCCTACAC GGCAGAGGCT
GGCATGGGGC TTCGCTTTCA CTACATTTCG GAGGGGCTGT TCGACGCTGG CGGCACACGG
ACCAACAAGG TTGAGGCGAA GATTGTCGCA CGGGCCATCA TCGACCACGC GCGCGAATGC
CCGCATCTGT CGCTGGGGGT TGCCGCTTTT TCCGCCGCGC AACGGCGCGC CATTCTTGAT
CAGCTGGAAT TGATGCGGCG TAGCTTGCCG CCTGACACAG AAGCGTTTTT TCAAGCGCAT
CCTGCTGAAC CGTTTTTCGT CAAGAATCTG GAAAATGTTC AGGGTGATGA ACGCGATGTG
ATATTCATTT CAGTGGGCTA CGGTCCCACC ACTCCGGGCG GGCGTCCTCC CATGCGCTTT
GGTCCGCTTG GCTCCGAGGG AGGCGAGCGG CGCCTCAATG TCTTGATTTC GCGCGCCAAA
CAGCGTTGCG AGGTGTTTTC GTCCATAACC GACGAGGATA TTGAGCCTGA CTTCGCCGCG
ACCCGCAAGG GCGTTTTGGC GTTCCGAATG TTTCTGCACT ATGCCCGGAC GGGTCGGCTT
ACCATGGCGG AAAGCACTGG CCGGGACCAT GACAGCGTCT TTGAAAAGCA AGTGGCCAAG
GCGCTTCAGG CGCGAGGGTA CCAGGTGCAC GCGCAGGTTG GGCTTGCGGG GTTTTTCATC
GACCTTGCCG TGGCTGATGC TGAGCGTCCG GGCCGCTACC TGCTGGGCAT CGAGTGCGAC
GGCGCATCTT ACCATGACGC CCGCTCCGCG CGGGATCGCG ACCGGCTGCG TCAGTCCGTT
CTGGAAAGCC ACGGCTGGAT AATCCATCGG GTCTGGAGTA CGGACTGGTT TCAGCGTCCC
GCGGAGCAAC TTGAACTCAT TATTGCAAGG ATCGAGGCGG CCAAGGAAGA GTATGACGCC
AAGACTGCCA ACCGCGCCAC ACGGGCTGTG CCCATTGAAA TTGTTGCGGT TGAGCGTGAG
GACGTGACCG AGATCGGGCT TGTTCCCACG GATGAAGAAA TTTCGTCTTC TGGGGCAGAG
TATGTCGAGG CGGTGTTGCA ACGCCCGACA TATCGTACCG ATGAATTGCA CGAGACCCCG
ACGGGCATAC TGACAAACCT TGTCGTTGAT GCCGTGAGTG TTGAAGGGCC GGTGCATGTC
GATGAAGTTG TTCATCGCTT TCGTGATGCC TGGGGATTGA AGAGGGCAGG CGGACGTATT
CATGAGGCCG TTGAGGCTGC AGTTAAAGTG GCGGTGAAGA CGGGACGTGT CGAGCGTGTG
GCGCAATTCT TATCCATTCC CAACGACCCC GTGCGTATTC GTGACAGGAG CGCCACTAGG
TCGATCAATT TGCGCCGCGC GGACATGCTG CCGCCAGCAG AAATAGATGC CGCCATTCTG
GATATTGCTC GGAATAACTT TGGCGCAACA AGAGACCAGA TGGTGCTGGC GACGTCCCGC
ATGCTGGGCA TCAAGGTGAC CAGCGCGGCC GTGCGGGCTG TCATCGAGCA GCAGATAGAC
GAGGCGGTAG CCTCTGGGGC CCTTGTGCAA CAAGCAGATA TTCTGACACC GGCAGCTCTT
AGCTAG
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| Protein sequence | MTTDWALHAD SDSNSVFQGN LPLVEKLERA RVELLDLSAR NRLLNMPRSG KSARTIEIVD
EKSAQIFRLL VREGKPFTFV AGKSARTEEA EGDAETYEIT DLAQPDDDIA DDRGVFSRHV
DTRLQTRLTP QGLQKRLLEL YFDARTLEEE QGVNILYLTL GTLKWVDPAN AANTRYAPLL
LIPVLLDRGN AAEKFKLRVR QEDFASNLSL ETFLDRVHGI CLPAFEATDS FEPISYFEGI
ADAVAGKPDW AVQTDDIALG FFSFAKFLMY RDLDPETWPA HARISDRPLI RCALADGFTG
SDGMIPEDAK IDPFIPPSEM LHIVDSDSSQ ALAVHEVRRG RDMVIQGPPG TGKSQTIANI
IAAAIADGKT VLFVAEKMAA LEVVKRRLDA TGVGDACLEL HSNKANKRAL LDELRRTWHL
GAPKIQDAGT LYTRLAELRD GLNAHAARLH CCHTTAGLSA YQVIGQLVRL RQAGERPNDI
VLETPGGWTV DGYAERHAVL AELAERVKEI GKPSEHVWSG VGLASITPME VERFTGRFAS
LAERLEALDA KQADMATMLE CERAATLDAL LPSIETAARI AGAPELSESA LSSSAWQEEY
DAISALLVNG KRYAQLKAEL ATVFTQAAWE TDTGAARATL ARLPHSFSLA AFDRLVVLVD
RLPQLTAEAE ALARAMGRPA PLALADVLRL VKIGERVLAA PSSNCEAFAA DAWDGNAGRA
KDLAGAALTL EQVRSEIGES ISDAAWGMDL SAMRTTLAAH GTGFFKIFSG EWRRANRIVR
SILVQPEQPL PATLTQLDAL ARGQAAKRLL EAEDALGKSL FAADWRQDRS DSGPLLALVE
WMQSVEGFGA EPRTVVAANP DRDVIARHVV GTERLLAELV NIVAQIWSEL PEPAVVFGET
PTAERGSIAQ LLSAAVSFTG AARETEALFT AVPASLSDRL AMLERLAEGQ ACAASLAAGD
ALGRTAFGTR WAGKASAWHE LEGAATWIAA NGDIRLLASR VADRGQLAVQ AEAIKAERAT
LIADTASLLE DIHLASRREY EASQIGTVPI ERLLVSLGEW AASGEQLFKW VAYRDRADRG
RALGCGDVVM RLEDGRLTPS EVLPAFEMAY YEAIYAELVR SDPDLGRFDG TLHGRLVRDF
VDLDRQRIAL AGVEVVQAHH KRVPPRDGSA IGPLGVLRAE MQKKRGHMPI RKLMERAGQA
VQALKPVFMM SPLSVAQFLA PGVFEFDLLV MDEASQIQPV DALGAIARAR QVVVVGDPKQ
LPPTAFFSKI TGNGSEDDDS DGGRVADIES ILGLFTARGL PTRMLRWHYR SKHQSLIAVS
NRQFYEGKLF IVPSPYTAEA GMGLRFHYIS EGLFDAGGTR TNKVEAKIVA RAIIDHAREC
PHLSLGVAAF SAAQRRAILD QLELMRRSLP PDTEAFFQAH PAEPFFVKNL ENVQGDERDV
IFISVGYGPT TPGGRPPMRF GPLGSEGGER RLNVLISRAK QRCEVFSSIT DEDIEPDFAA
TRKGVLAFRM FLHYARTGRL TMAESTGRDH DSVFEKQVAK ALQARGYQVH AQVGLAGFFI
DLAVADAERP GRYLLGIECD GASYHDARSA RDRDRLRQSV LESHGWIIHR VWSTDWFQRP
AEQLELIIAR IEAAKEEYDA KTANRATRAV PIEIVAVERE DVTEIGLVPT DEEISSSGAE
YVEAVLQRPT YRTDELHETP TGILTNLVVD AVSVEGPVHV DEVVHRFRDA WGLKRAGGRI
HEAVEAAVKV AVKTGRVERV AQFLSIPNDP VRIRDRSATR SINLRRADML PPAEIDAAIL
DIARNNFGAT RDQMVLATSR MLGIKVTSAA VRAVIEQQID EAVASGALVQ QADILTPAAL
S
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