Gene DvMF_1932 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvMF_1932 
Symbol 
ID7173850 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris str. 'Miyazaki F' 
KingdomBacteria 
Replicon accessionNC_011769 
Strand- 
Start bp2383139 
End bp2384146 
Gene Length1008 bp 
Protein Length335 aa 
Translation table11 
GC content62% 
IMG OID643540448 
ProductTRAP dicarboxylate transporter, DctP subunit 
Protein accessionYP_002436343 
Protein GI218887022 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1638] TRAP-type C4-dicarboxylate transport system, periplasmic component 
TIGRFAM ID[TIGR00787] tripartite ATP-independent periplasmic transporter solute receptor, DctP family 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones96 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAGAG CAGCCATGCT GGTAGCCGCG CTCCTCATGA CCGTCGCGTT GGCGGCACCC 
GTACAGGCGG CCTACGATGG GCCCAAGATC AAGTTCCGCC TGGCGCACAC CACGCCTCCC 
GGTAACCATA TCACCCTTGC CTACCAGAAA TTTGCCGACC TGGTGGCGGA AAAGTCGGGC 
GGAAAGATCA CTGTGCAGGT GTTCCCCAAC GCCATTCTGG GCAGCGACCG GGTGCTGGTG 
GAAGGGGCGC AGAAGGGCAC GCTGGAAATC GGCGTCAGTT CCACCCCGAA CCTTGCCAAC 
TTCTCCAAGC TGTATTCGGT GTTCGACCTG CCCTACATCA CCTCGCCCAA GTTCCAGAAA 
AACCTGTACT CCGCCATTGA TCCGGGCGGC ACGCTGTACG ACTACTTCCT GAAGGTGGCC 
AACGACGTGG GCCTGCAACC CATCATGTAC GCGGAATACG GCTACCGCCA CTTCGTGTCC 
GTAAAGCGCC CGCTGGGCAA GGCTTCGGAC CTTGCGGGGC TGAAGATGCG CACCACCGAT 
TCACCCGTGG AAGTGGGCGT TGCCAAGGCG CTGAACACCA ACCCGTCGCC CATCGCCTGG 
GGCGAAGTGT ACACCGCGCT GCAACAGGGC ACCATCGACG CCGAAGGCAA CACCTTTCCC 
CATCTGTTTG GCGCCAAGCA CCATGAAGTG CTGAAGTACG CCATCACTTC CGCGCACAAC 
TACTGCATGC AGGTGGCCAT GGCCAACAAG GCATGGTGGG ATGGGCTGCC CGACGCCGCC 
AAGCAGGTCA TCAACGCGGC CGCCCGCGAG GCCACCCAGT ATCAGCGCGA TGTGCTGTAC 
CCCGAAAACG AAAAGGCCGC CCGCGAAGGC TTCATCAAGG CCGGCATCAC CATTCACGAT 
GCCACGGACG CGGAAATCGA CGAATTCCGG AAGCTGACCC GCCCGGTGTG GGACACCGTG 
ACCCTGCCGG CCGAACTGAT CAAGCTCGTG CAGGACACGC AGAAGTAG
 
Protein sequence
MKRAAMLVAA LLMTVALAAP VQAAYDGPKI KFRLAHTTPP GNHITLAYQK FADLVAEKSG 
GKITVQVFPN AILGSDRVLV EGAQKGTLEI GVSSTPNLAN FSKLYSVFDL PYITSPKFQK 
NLYSAIDPGG TLYDYFLKVA NDVGLQPIMY AEYGYRHFVS VKRPLGKASD LAGLKMRTTD 
SPVEVGVAKA LNTNPSPIAW GEVYTALQQG TIDAEGNTFP HLFGAKHHEV LKYAITSAHN 
YCMQVAMANK AWWDGLPDAA KQVINAAARE ATQYQRDVLY PENEKAAREG FIKAGITIHD 
ATDAEIDEFR KLTRPVWDTV TLPAELIKLV QDTQK