Gene DvMF_1924 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvMF_1924 
Symbol 
ID7173842 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris str. 'Miyazaki F' 
KingdomBacteria 
Replicon accessionNC_011769 
Strand
Start bp2372553 
End bp2373755 
Gene Length1203 bp 
Protein Length400 aa 
Translation table11 
GC content73% 
IMG OID643540440 
ProductABC transporter related 
Protein accessionYP_002436335 
Protein GI218887014 
COG category[E] Amino acid transport and metabolism 
COG ID[COG3842] ABC-type spermidine/putrescine transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones96 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTTCTTG CGGTAGAGGG GCTGTGCGCC TCGTACGGAG AGGGCGATGC CGCGCCCGGC 
GGCGCGGGGC TGGTGGCAGC CGCCGTGGGG CGGGCCGTGG GGTTCGTCGC CGGGCGGCGC
GGGCCGCGCG CTCCGCTGCC GCAGGCCCGG CCCGATCTGC CCGATCTGCC CGATAGGCCC
GATAGGCCTG ATCGGCATGA TCAGTCTTCT CCAACGTCAC AGGCCGGGAG CAACGGACAC
TCCGCAGCGG CCCCCCCGGT GTTCAGCGGG GTGACCTTCC ATCTGGCGCA GGGCGAAATG
GCCTGCCTGG TTGGGCCTTC CGGCGTGGGC AAGACCACCC TGCTGCGGGT ACTGGCCGGG
CTGCACCCCT ACGACGCGGG CGGGTTCACC GTCACCCCGC CTGAAGGGCA CGATGATGCG
GTGATCCTGG TCTTTCAGGA TTACATGCTG TTCCCGCACC TGACCGTGCG CGACAACGTG
GCCTTCGGGC TGCGGGCACG CGGCATGGGC CGTCGCCAGC GCATCCGGCG GGCCGGGGAC
ATGCTGGCCG ACTTCGCCAT CGGAGACCTG GCCCACCGCT ATCCGGCCCA CCTTTCCGCC
GGGCAGCGCC AGCGCGTGGC CCTGGCGCGC GCGCTGGTGT GCAATCCGGC CCTGCTGCTG
CTGGACGAGC CCTTCGCCAA CCTGGACCGC ACCCTGCGTC TGGAGATGGC CGCCTACGTG
CGCGACACGG TGCGCCGCTA CGGGGTGACC ACTCTCAGCG TCACCCACGA CCTGGAAGAA
GCGTTCGCCG TGTCCGACCG CATCGGGGTC ATGCTGCACG GTCGGCTGGC CCAGTTCGGC
ACCCCGGCGG AATTGTACGC CCGGCCCGTG TCGCTCGACG TGGCGCGCTT CATGGGGCCG
GTCAACGTGC TGGACGGCCC GGCGTGCACG GCCTTCGGCC TGCCCCTGCC GGGCGGCTGC
CTGTGCGGCG GCGGCGACGA TTGCGCGCCG CTGGCCCTGC GGCCCGAAGG GCTGGCCGCC
ACCCCCGATC CGGACGGCCC CGCCGTGGTC GCGCGGGCCG TGTTCACCGG GCAGGTCACC
CGGCTGACCC TGTGTCCGGC GCGCGCGGGG ACTGACCTCC GGCCCGGCAT GCCGGTACTG
GTGGTGCACA CCCTGCGCGC GGACCTGCCG GAAGGGACGC GGGTTCGCGT GGAGTTGGCG
TAG
 
Protein sequence
MVLAVEGLCA SYGEGDAAPG GAGLVAAAVG RAVGFVAGRR GPRAPLPQAR PDLPDLPDRP 
DRPDRHDQSS PTSQAGSNGH SAAAPPVFSG VTFHLAQGEM ACLVGPSGVG KTTLLRVLAG
LHPYDAGGFT VTPPEGHDDA VILVFQDYML FPHLTVRDNV AFGLRARGMG RRQRIRRAGD
MLADFAIGDL AHRYPAHLSA GQRQRVALAR ALVCNPALLL LDEPFANLDR TLRLEMAAYV
RDTVRRYGVT TLSVTHDLEE AFAVSDRIGV MLHGRLAQFG TPAELYARPV SLDVARFMGP
VNVLDGPACT AFGLPLPGGC LCGGGDDCAP LALRPEGLAA TPDPDGPAVV ARAVFTGQVT
RLTLCPARAG TDLRPGMPVL VVHTLRADLP EGTRVRVELA