| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DvMF_1395 |
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| Symbol | truA |
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| ID | 7173299 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011769 |
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| Strand | + |
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| Start bp | 1701656 |
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| End bp | 1702489 |
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| Gene Length | 834 bp |
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| Protein Length | 277 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 643539902 |
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| Product | tRNA pseudouridine synthase A |
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| Protein accession | YP_002435811 |
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| Protein GI | 218886490 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0101] Pseudouridylate synthase |
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| TIGRFAM ID | [TIGR00071] pseudouridylate synthase I |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 88 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCCGTC TCGCGCTGAC CGTTTCCTAC GTGGGCACCC GGCTGGCCGG GTGGCAGATC
CAGGCCCGCA CCGACCGCCC CCAGCCGCGC ACGGTGCAGG GCGAACTGGA GCGCATCGCC
GAACGCATCG TGGGCGCGCC CGTGCGCCTG CACGGCGCGG GCCGCACCGA TTCCGGCGTG
CACGCAGAGG CCCAGGTGGC CCACATGGAC GTGCCCGACC ACCGGGCGGA CCTTGATTGG
CAGCGCGCCT TCAACGCCGG GCTGCCCGAC GACATTTCCG TGGCCGCCGT GGTCCGCGTG
CCCGACGAGT TTCATGCCCG CTTCGACGCG CGCGGCAAGA CCTACACCTA CCGGCTGTGG
CCCGAACGGC GCTGGGTGCC GCCCCGGCTG GCCCCCTTTG CGTGGGCCAC GGGGCAGCTG
GATATGGACG CCATGGACGC CGCCGCCGCC TACCTGCACG GCATGCACGA CTTTGCCAGC
TTCCAGAACA CCGGCACCGA CATCGTCACC ACCGTGCGCA CCGTTACCAG GGTGGCCCGC
CGCCACGAGG GCGAGGCCCC GGTGCAGCCC GCGCTGCCCG GCGCACAGCC CCTGGCTGGC
GCGGAAGAAA CGGCAAACGC CATGGCCGGC GGCCTGCGCG TCATGGCCTG GGACTTCGAG
GCCGACGGCT TTCTCAAGCA GATGGTACGC AACATGATGG GCCTGCTGGT GGCCGTGGGG
CGCGGCAAGC TACCCCCCGA CGCCGTGCCC GCCATACTGG CCGCCCGCGA CCGCAAAACC
GCGCCCGCCA CGGCCCCGGC GCATGGGCTG ACCCTGACCC GCGTGCATTA CTAG
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| Protein sequence | MARLALTVSY VGTRLAGWQI QARTDRPQPR TVQGELERIA ERIVGAPVRL HGAGRTDSGV
HAEAQVAHMD VPDHRADLDW QRAFNAGLPD DISVAAVVRV PDEFHARFDA RGKTYTYRLW
PERRWVPPRL APFAWATGQL DMDAMDAAAA YLHGMHDFAS FQNTGTDIVT TVRTVTRVAR
RHEGEAPVQP ALPGAQPLAG AEETANAMAG GLRVMAWDFE ADGFLKQMVR NMMGLLVAVG
RGKLPPDAVP AILAARDRKT APATAPAHGL TLTRVHY
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