| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DvMF_1330 |
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| Symbol | |
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| ID | 7173234 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011769 |
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| Strand | + |
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| Start bp | 1624569 |
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| End bp | 1626005 |
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| Gene Length | 1437 bp |
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| Protein Length | 478 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 643539838 |
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| Product | (dimethylallyl)adenosine tRNA methylthiotransferase |
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| Protein accession | YP_002435747 |
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| Protein GI | 218886426 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0621] 2-methylthioadenine synthetase |
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| TIGRFAM ID | [TIGR00089] RNA modification enzyme, MiaB family
[TIGR01574] tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 65 |
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| Fosmid unclonability p-value | 0.0822103 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGACC GTACATTTCA TATCCTGACC TTTGGCTGCC AGATGAACGT CAACGATTCC
GACTGGCTGG CCAGAGCCCT TGTGGCGCGC GGCTTCACCG AAGCCCCCCT GGGCAAGGCC
CGCGTGAACA TCGTCAACAC CTGCTCGGTG CGCGACAAGC CGGAGCAGAA GGTCTACAGC
GTGCTCGGGC GCATCCGCCA GGCCACCCGC AAGCTGCCCG ACGCCTTTGC CGTGGTGGGT
GGCTGCGTGG CCCAGCAGAT CGGCTCCGGG TTCTTCACCC GTTTTCCGCA GGTGCGGCTG
GTGTTCGGCG GCGACGGCTC GTCCATGGCT CCACAGGCCA TCGAACGGCT GTGCGCCGAG
CCGGGCCTGC GCCTCTCGCT GCTGGACTTT TCCGAGGAAT ACCCCGAGCG CGACGCCCAA
CTGGACGCCG GGCCGGTGCC GCCTTCCGCC TTCGTGAACA TCATGCAGGG CTGCGACAAC
TTCTGCGCCT ACTGCATCGT GCCGTACACG CGGGGCCGCC AGAAGTCGCG CGCGGCGGAC
GCGGTGGTGC GCGAATGCGC GGAACTGGTG GAGCGCGGCG CGAAGGAAAT CACCCTGCTC
GGCCAGAACG TCAATTCCTA CGGGCAGGAC GCGGAAGCCG CCCGCCAGGC AACGGTGGCG
GGTGACGGCA ACGCCGTGAC CTTCGCCGAG CTGCTGCACC GCGTGGCCGC CCTGCCCGGG
CTGGCCCGGC TGCGTTTCGT CACGCCGCAC CCCAAGGACA TCGCGCCGGA GGTCATCGAC
GCCTTCGGCA CGCTGGACAA CCTGTGCCCG CGCCTGCACC TGCCTATGCA ATCAGGGTCG
GACCGCATCC TGAAGGCCAT GGGCCGCAAG TACGACATGG CCCGGTACAT GGACATCGTG
CACCGGCTGA AGGCGGCCCG ACCGGACATC CAGCTTTCCA CCGACATCAT CGTGGGCTTT
CCCGGCGAGA CGGAGCAGGA CTTCGAGGAC ACCCTGTCCG CCATGCGGGC CGTGGGCTTT
GCCGCCAGCT TCTCGTTCTG CTATTCCGAC AGGCCGGGCA CCCGCGCGGA AATGCTGCCC
GGCAAGCTGG ACGCCGCCGA AAAGGCCGCC CGCCTGGCCC GTCTGCAGGA ATGGCAGAAT
GATTATACTG AACAGTGCTT GCGGAACATG GTAGGGTTGC ACACAATGGT GCTGCTGGAC
GGCATGAGCC GCAAACCCGG CATGGCCACC CCGGAATCGC ACGAGGGCGT GCATGACGGC
GCCACGGGCA CTCCCGGCGG TGAAAGCTGG CAGGGGCGCG ACCCATACGG CCAGGCAGTC
AACGTGGTGA TGCCCCCCCG TACGGAGGGC GGCCCGGAAG GCTGGCTGGG CCGGATCGTG
CCGGTGACCA TCGTGGAGGC CAAGAAGCAT TCGCTGCGCG GAGTATTGCG GGCATGA
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| Protein sequence | MSDRTFHILT FGCQMNVNDS DWLARALVAR GFTEAPLGKA RVNIVNTCSV RDKPEQKVYS
VLGRIRQATR KLPDAFAVVG GCVAQQIGSG FFTRFPQVRL VFGGDGSSMA PQAIERLCAE
PGLRLSLLDF SEEYPERDAQ LDAGPVPPSA FVNIMQGCDN FCAYCIVPYT RGRQKSRAAD
AVVRECAELV ERGAKEITLL GQNVNSYGQD AEAARQATVA GDGNAVTFAE LLHRVAALPG
LARLRFVTPH PKDIAPEVID AFGTLDNLCP RLHLPMQSGS DRILKAMGRK YDMARYMDIV
HRLKAARPDI QLSTDIIVGF PGETEQDFED TLSAMRAVGF AASFSFCYSD RPGTRAEMLP
GKLDAAEKAA RLARLQEWQN DYTEQCLRNM VGLHTMVLLD GMSRKPGMAT PESHEGVHDG
ATGTPGGESW QGRDPYGQAV NVVMPPRTEG GPEGWLGRIV PVTIVEAKKH SLRGVLRA
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