| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DvMF_1325 |
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| Symbol | |
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| ID | 7173229 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011769 |
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| Strand | + |
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| Start bp | 1617695 |
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| End bp | 1621063 |
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| Gene Length | 3369 bp |
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| Protein Length | 1122 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 643539833 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_002435742 |
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| Protein GI | 218886421 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1729] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 52 |
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| Fosmid unclonability p-value | 0.00379611 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGAAACGAC CCACCGCCGC CGGTCTTGCC CGGCTGCTCC TCATCGCGGC CCTTGCCGGA
CCGCCCGCCA CGGCCGCGCA CGCGGCCTCG TGGCAGTGGA GCGGCCTGCC CGACCGCGAG
CGGGTGACCA TCACCCTCGA CCGCCCCGGC GACGTGGACG TGGCCCGCAC CGGGCGGCAA
ACCCTGTCGC TGACATCGCG CGCCGTGGGT GCGGCTCCCG CACGCATGGG CGGGGCCGAC
CCGGCAGGCG CGGCTCTGGT GGGCGAGGTT GCCCCGCAGC CCGGCGGGCT GCGCATCGAC
ACGCGCACTC CGGGGTTCGG CTACGTGGTC ACCCGTCCCG CCCCCGACAG GGTGGTGGTG
GACATCTTCC GCGATCCCAT GGGCGAACGC TGGACTGCCT CCGACGGGGG CCAGCCTCCC
GCCCAATCGG GCCAATCGGG CCAATCGGGC CAGTCGGGCC AGTCGCCAGA ACAGGCAGGG
CGGGCAACGC CCCCGGTGCC CACTCCGGCA CCGCCCGCCG CCCCGGCGGG ACAGCCCGCC
CGGACGGCCC AACCCGCGAC TGCTGCGACT CCCGCCCCCC CTGCACCGTC GCCCTCCACC
GCTCCCGCAC CGGCGCAGAA CGGCGCCCGG CAGCCGCGCG TGGTCGAACG CGCCCTCACC
GACGGCAGCG ATACCGCCAA CGGAACCGGC CAGACCCAGG CCGCGCCCGC AGGCGGGGTT
ACCGGCAAGC TTTCCACCGG ACCGGGCACT GCGCCCCCCG CGCAGGTTAC CGGACAAATC
GGGGCCACGC CCCCGGCCCA GCCACAGAAC GACGCCGCCC AAACTGGCGG ACAGCCCGCA
GCACAGGCGC CCGAGCAGCC ACGCAGCTTC TTTGCCGTGC CCTATTCCAT CCGGGCGCGC
ATCAATTCTG GCGGCCCGGC CGAATGGCCG GAAGAGGCGG CGGCATCCGC CCAGGCCACG
CCCCCCGCGC CGGTGCCCTC GCGCGGGGAA GCCGGTCCCG CCGCCACGGC CAGACAGGAC
GAGCAGCCCG CCGCGCCGCA GGCCGTGGCC CAGGCGACTG CGCAGACAAG CCAGACCGGA
CAGACGGGGC AGACGGGGCA GGCCAATGGC CAGGCAAACG GGCAGCCCAA GGGCAAGGAA
CAGACCAAGG ATCTGGCCAA GGATATGGCC AAGGATATGG GCGAGGCGCG CAAGTCCGCA
GCCCCCCGTC CCGAAGGCCC CACGCCGCCA CCGCAGCCCG ACGGCCAGCC CACGCCCCCG
GTCACCGGCA ACGCCACCTC GCCCCAAGCC GAGGCGGCGG GCAAGGCCGC GACCAACGGC
ACCAATGCCA CCAACGCCAC CCAGGTGGTG TACGTGGACG AAAAGGGCAA TCCCGTTCCC
GCGCCGCCGG TCCCGGCGGA ACTGCTGGAG CAGGCCAAGA CCTTCATGGT CAACGCCGAC
TACCCCAAGG CGTTGGAACT GCTGGAAACC CTGAAGGGCC TGCGCGACAC GCCCAAGGAC
ATGTACGAGG AGGTGCTGTA CCTCATCGGC GACGTGCTCT ACGCGCAGAA CAAGGACAAC
ATCCTTCCCG TTTTCGACAA GATCATCACG GCCACCAGCG AGGCCATGAA CTACAACCTG
AAGTCGCACC GGGTGCCGCA GGCCCTGTTG CGCCTCGGGC TGCTGAACAC GCGCATCGGC
AACTCGCAGG AGGCGGAAGG CTACTTCAAC CTGCTACGGC GCCAGTACCC GCACGACGAA
AACGCCGCCC TGGCCATGTA CTACGCGGGC GAAGAGGCCT ACAAACGCGG CGACTACCAG
AAGGCTGCGG ACAAGTTCCA GTCCATCGTG CAGGACTTTC CCGAAAGCAA GTACGTGCGC
GAAGGTTCGG TCAGCCTGGC CCGCACCCTG TACAAGATGG GCTACTACCA GCAGGCCGCG
TCCATCCTCG ACTTCGTGGA CAAGCGCTGG GGCCGCTTCT ACCTGGAATA CCCGCAACTG
CTCACCGTGG CCGCCGACGT GTCCGACCAC CTGGGCAAGC TGGACGACGC CCGCGCCAAC
TACTGGCTGT ACTACAACCT CAACCCTGAA GCGGACGACA TCGACACCGT GCTGGCCCGG
CAGGGCGACA TCCTGGCCAA GCAGAAGCAG CCGGAGGCCG CCCGGGTGCT GTACGAAGAG
GCGGTGCGCC GCTTCCCGGA CAAGGACGGC GGGCTCATAT CGCTGATGCG CCTCGCGGAG
GAAGGCATCC ACGACACGCC GAGCATCGCA GAGATGATCT CGGTGTTCCA GAAGCCGGAC
AACACCCGCC CGGTGCAGGC GTACACCACC ATCATTTCCG GCCACCCGCA GAGTCCGCTG
GTGCCGCTGG CCCGGCTGAA GCTGACCATG TGGTACCTGT GGAACCGCCA GTTCCCCGAG
GCGCTGGCAT CCGCCGTGGA ATTCGCCCAG GCCCACCCCG GCAGCGACAT GCTGCCCAAG
GTGCGCGAAA TCGCGCTGCA AAGCTTCACC CAGATGGTGG GCGAGTCGGT GGCTGACGGC
AACTATGGCC GCATCCTGCA ACTGTGGGAA CAGTACCCGC TGATCCAGGA GAACGAGAAG
GACCTGTCGG TGGACACCCA CGTGGCCATC GCCCTCAGCT ACGCCAACAC CGGGCAGCCC
CAGAAGGCGC TGGAGATGCT GGACGGGTTC CTGAAGGGGC CGAAGGATCC CAAGCACGGC
GAAACCGTGC TGGCCCTGGC GCTCAAGGTG TATCTGGAAA CCCAGAACTG GCAGCGCATC
GTCGACGTGA TGCAGGGCGT GTCCGGCTGG AGCCTGTCCG ACCCGGTGCA GAAGCAGGCG
GACTACGCGC TGGCCCTGTC CCAGGAAAAC CTGGGGCACC CCGACCTGGC CGTGCCCCTG
TGGCAGCGCC TGTACGACCG CAAGGACCTG CCCCAGGAAC AGCGGGCCTA CGTGGGCTAC
TTCCTGTCGC GCGACGCGGA GCGCAAGCGC GAACTGGAAA AGGCCTACCT GCTCACCCGC
GAGACCCTGT CCGACTTCCT TGCCGTGGCC CAGGCCAGCC CGGAAAAGGA AGACACCCCG
CGCATCAAGG AAAGCCTGCT CTCGCTCATG GACATCACCG AGGCGGCGGG ACGCCTGCGC
GAATCGCTGG ACTGGACCGA CCAGTACGCC AGGTACGTGC CCGATTCCGA CCCCGGTTAC
GCGGCCATGC GCTATCGCGT GGCGCGCCTG CAACGCAAGA TGGGCAACGT CGACGCCTGG
AAGGCCACCC TGGAAGACCT GGCCCGGCGC GACCCGCAGT CGCTGTATGG CCGGATGGCC
GCGTCCGAGT TGCGCACCAC CGACGTGACC AAGGGGCTTT CCGGGTTCAC CCAGGGCGCG
CAGCCGTAG
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| Protein sequence | MKRPTAAGLA RLLLIAALAG PPATAAHAAS WQWSGLPDRE RVTITLDRPG DVDVARTGRQ
TLSLTSRAVG AAPARMGGAD PAGAALVGEV APQPGGLRID TRTPGFGYVV TRPAPDRVVV
DIFRDPMGER WTASDGGQPP AQSGQSGQSG QSGQSPEQAG RATPPVPTPA PPAAPAGQPA
RTAQPATAAT PAPPAPSPST APAPAQNGAR QPRVVERALT DGSDTANGTG QTQAAPAGGV
TGKLSTGPGT APPAQVTGQI GATPPAQPQN DAAQTGGQPA AQAPEQPRSF FAVPYSIRAR
INSGGPAEWP EEAAASAQAT PPAPVPSRGE AGPAATARQD EQPAAPQAVA QATAQTSQTG
QTGQTGQANG QANGQPKGKE QTKDLAKDMA KDMGEARKSA APRPEGPTPP PQPDGQPTPP
VTGNATSPQA EAAGKAATNG TNATNATQVV YVDEKGNPVP APPVPAELLE QAKTFMVNAD
YPKALELLET LKGLRDTPKD MYEEVLYLIG DVLYAQNKDN ILPVFDKIIT ATSEAMNYNL
KSHRVPQALL RLGLLNTRIG NSQEAEGYFN LLRRQYPHDE NAALAMYYAG EEAYKRGDYQ
KAADKFQSIV QDFPESKYVR EGSVSLARTL YKMGYYQQAA SILDFVDKRW GRFYLEYPQL
LTVAADVSDH LGKLDDARAN YWLYYNLNPE ADDIDTVLAR QGDILAKQKQ PEAARVLYEE
AVRRFPDKDG GLISLMRLAE EGIHDTPSIA EMISVFQKPD NTRPVQAYTT IISGHPQSPL
VPLARLKLTM WYLWNRQFPE ALASAVEFAQ AHPGSDMLPK VREIALQSFT QMVGESVADG
NYGRILQLWE QYPLIQENEK DLSVDTHVAI ALSYANTGQP QKALEMLDGF LKGPKDPKHG
ETVLALALKV YLETQNWQRI VDVMQGVSGW SLSDPVQKQA DYALALSQEN LGHPDLAVPL
WQRLYDRKDL PQEQRAYVGY FLSRDAERKR ELEKAYLLTR ETLSDFLAVA QASPEKEDTP
RIKESLLSLM DITEAAGRLR ESLDWTDQYA RYVPDSDPGY AAMRYRVARL QRKMGNVDAW
KATLEDLARR DPQSLYGRMA ASELRTTDVT KGLSGFTQGA QP
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