Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DvMF_1298 |
Symbol | |
ID | 7173201 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
Kingdom | Bacteria |
Replicon accession | NC_011769 |
Strand | + |
Start bp | 1587062 |
End bp | 1589407 |
Gene Length | 2346 bp |
Protein Length | 781 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 643539805 |
Product | phage tail tape measure protein, TP901 family |
Protein accession | YP_002435715 |
Protein GI | 218886394 |
COG category | [S] Function unknown |
COG ID | [COG5283] Phage-related tail protein |
TIGRFAM ID | [TIGR01760] phage tail tape measure protein, TP901 family, core region |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.0000000000950685 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGAAGTGT TCAGCGTTTT CGCCACCATG TCCTTGCAGG ACATGATCTC CGGCCCGCTC GGCTTCATCA CCGGCAGGAT GAAGCAGCTT GCGCAGGCTG CCGACGGCCT TGGCGGGCGC ATGGGCAAGC TGGCCATTTC TATGGCTCCT GTTGCCGTGG CCGCAGCCGT GCTGCTGGCC ACTCTGGGCC TTGCCGCGCG CGAAGCCATT GCCTTCGAGA GTTCCATGGC CGACGTGGCC AAGGTGGTGA ACTTCGAGAG CGCGGGCGAG CTGCAATCCA TGTCCGACAC CATTCTGGAC ATGAGCACCC GCATTCCCAT GGCGGCGGAC GGGCTGGCGG CCATCGTGGC CGCCGCCGCG CAAAGCGGCG TGGCCAAGGC CGACCTGACG GAGTTTGCCG AACAGGCCGC CAAGATGGGC GTGGCCTTCG ACCTGACCGG GGACCAGGCG GGCAAGATGA TGGCCGACTG GCGGGCGGGC ATGAATTTGT CGCTGCCGCG TGTCTACGCT TTGGCGGACA GCGTGAACCA CCTTTCCAAC AACATGAACG CCACCGCCCC GGCGCTGGGC GAGGTGATCC AGCGCGTGGG CGCGGTGGGC ATGGCGTCGG GCCTTGCGGA AACGCAGGTG GCGGCGCTGG GCGCGGCGTT CCTTTCCGCC GGTGCCTCGC CCGAAATCGC GTCCACGGCG CTCAAGAAGT TCACGTCCAC GCTGGTCAAA GGCACGGCGT TGAGCAAGGA CGCGCAGGTG GCCTTCGGCT CGCTGGGCTT TTCGGTCACG CAGATGGCCA AAGACATGCA AACCGACGCG CAGGGCACGA TCTTCAAGGT GTTGCAGGCG CTGGCCGACA AGCCCAAAGA ATTGCAGATG TCGCTGCTCA CTGAGATGTT CGGTGAAGAA GCGCTGGGGG CCATTGCCCC GCTGCTGGCC AACATGGGCA ACCTGACGCA GGCGTTCGAG CTGGTGGGTG ATGCCTCGGC CTATGCGGGC AGCATGCAGG CGGAATTCGA CACCCGCAGC AAGACCACGG CCAACACACT GATCCTGCTG GGCAACAAGA TGAAGGCGCT GATGATCGTG GCGGGCAGTT ACTTTCTGCC GGTCATCGGG CGGGTTGCCG AAGGCATGGG CGGCTTCGTG GACATGCTGC GCGGCGCGGC GCAGACCGTG GCCGGGGAAT TCGCGCTCAA GCTGTTGGCG GGCATCGCCA CCGCCGTGGT GGCCGCCACG GCGCTGTCAG GGGCAATCTG GCTGCTGTCC GCCGCCGGTC CCATGCTGGC CAAGGCCCTT GGGCCGCTCA AGGCGGCGCT GCTGGGCCTG TCGTGGCCCA TGTGGGCGCT CATCGCCGTG GGCGCGGCAC TGTACGTGGC CTACCGCACC AACTTCGGCG GCATGGCCGA CACCATCGAC CGCTGGTGGT CACGCATCTC GCTGGTGTTC CGGGGCGTGG CCGCCGTGTT CGCCACGCTT ACCGACGGCG TGGGCGAGAT TCGCGGCCAG CTGGCCACGG ACATCCGCGC CGCCGGGTTG GAAAGTCTGG TGGCCGCCGT GGCCCGCGTG GTGTTCCGCA TCCGCGAATT CTTTACCGGC ATGGTTGATG CCGTGGCTCC TGTGGGCCAA CGCTTGGCGG ATATCCTTGG GCCTTCGTTT TCGGCCATTG CCGCCACGCT GGGGCAGGTT TTCGACGCGC TGGGCAGAAT GACCGCCGCC CTGTTCGGGG CCGGTGCCGC CACCGATGCG TCCGGCTGGC AGCGCTTCGG CGAGGTGCTG GGCACCTTCG TGGCCGGTGC GGCCGAAGGG GTGGCCATCG CCGTGCGTGC CCTGGTCGCG CCCATACAGA TTGCGGCGGG CGTGGTGCAG TTCTTCCTCG ACCTCATCAA CGGGGTCAGC CTGTTCGACG CCGGGGCGGC ATTTCTCAAC ACATTCACGG ACGGCATCAA GTCCGTGCTG GCCGTGCCCA TGGAAGCCGT GCGCGGCGCG ATGAACCTGA TTTCCAAGCT GTTGCCGCAT TCGGATGCCG ACGCGGGGCC GCTGTCCACG CTGACCGCAT CCGGCCGGGC CACCCTGACC ACCATGGGCG AGGGCATGCA GGCCGCCGCA CCGGACCTTA ACGCCGCACT GGATGACGCC CTGGGCGCGG CGGTGCCCCC CGGCACGCTG GAAGCCATGG CCGAGGTGGG CGTGACGCCC GCAAAGGGCC GCGAGGGCCG CACCGGCGGG CGCGGGGTGA CCATCCACAT CGGCAGCGTG AGCCTGCCGG GCGTGTCCGA CGCGCAGGGC TTCGTGTCCG AGTTGCAGGC CCTTGTGGCC GAGTACGACG GCGTTCCGGA AGGGGGCATG GCATGA
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Protein sequence | MEVFSVFATM SLQDMISGPL GFITGRMKQL AQAADGLGGR MGKLAISMAP VAVAAAVLLA TLGLAAREAI AFESSMADVA KVVNFESAGE LQSMSDTILD MSTRIPMAAD GLAAIVAAAA QSGVAKADLT EFAEQAAKMG VAFDLTGDQA GKMMADWRAG MNLSLPRVYA LADSVNHLSN NMNATAPALG EVIQRVGAVG MASGLAETQV AALGAAFLSA GASPEIASTA LKKFTSTLVK GTALSKDAQV AFGSLGFSVT QMAKDMQTDA QGTIFKVLQA LADKPKELQM SLLTEMFGEE ALGAIAPLLA NMGNLTQAFE LVGDASAYAG SMQAEFDTRS KTTANTLILL GNKMKALMIV AGSYFLPVIG RVAEGMGGFV DMLRGAAQTV AGEFALKLLA GIATAVVAAT ALSGAIWLLS AAGPMLAKAL GPLKAALLGL SWPMWALIAV GAALYVAYRT NFGGMADTID RWWSRISLVF RGVAAVFATL TDGVGEIRGQ LATDIRAAGL ESLVAAVARV VFRIREFFTG MVDAVAPVGQ RLADILGPSF SAIAATLGQV FDALGRMTAA LFGAGAATDA SGWQRFGEVL GTFVAGAAEG VAIAVRALVA PIQIAAGVVQ FFLDLINGVS LFDAGAAFLN TFTDGIKSVL AVPMEAVRGA MNLISKLLPH SDADAGPLST LTASGRATLT TMGEGMQAAA PDLNAALDDA LGAAVPPGTL EAMAEVGVTP AKGREGRTGG RGVTIHIGSV SLPGVSDAQG FVSELQALVA EYDGVPEGGM A
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