Gene DvMF_1233 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvMF_1233 
Symbol 
ID7173136 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris str. 'Miyazaki F' 
KingdomBacteria 
Replicon accessionNC_011769 
Strand- 
Start bp1521224 
End bp1522135 
Gene Length912 bp 
Protein Length303 aa 
Translation table11 
GC content70% 
IMG OID643539741 
Productformate dehydrogenase accessory protein 
Protein accessionYP_002435651 
Protein GI218886330 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG3058] Uncharacterized protein involved in formate dehydrogenase formation 
TIGRFAM ID[TIGR01562] formate dehydrogenase accessory protein FdhE 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones61 
Fosmid unclonability p-value0.0243277 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCTTCG ATTTCGACCG CGAGCTGCAA CGCCTTGAAG GCAAGCTGAA AGCCCTGCGC 
AGCAAGGAAT ACATCCCCGA TGCCCTGCTG GAGATCGTGG CGCGCACCGC CGCCATCCAG 
TTGGAGGCCC GCGCCGCCGC ACAGGCAGGC CCGCTGCCGG AACTGGCCAC GCCCGAGGCA 
CATGCCCAGG GCGCGCCGCT GCTCCCGCGC GACGCCTTCA CCTACGACAG GGCGCGCACG 
GCGGCCACCT TCGGTCGTCT GCTGGCCATG ATGCGCGCCG CCGGGGGCAG CCTTGGCGCT 
GCCGCCGAGG TGGTGCGCGA GGCCATGGAA AAGGGCGAGC TTGCCGTGGA TGACGCCTGC 
GACGCTGCCC TGCGCGACGA TTCTGCCTGG TTCGACGCCT GGGCCCTGCG CCTGAACGAC 
GCCCCCAGCC TGGTGCGCTT CCTGGCCATG GGCAGCGTTG TGCCTTCGGT GGAAGTGCTG 
GCCCAGGCGG TGGCGGCGGA ACAGGCCCGC CGCACCGGCG CGGACCAGCC GGGCGCCACC 
CCGGTGGTCT GGCAGCACGG CCACTGTCCG GTGTGCGGCA GCGCGCCGCT GGTGGGCCGC 
CTGGTGGGCA AGGAAGGGGC GCTGCTCCAT ACCTGCTCGT TCTGCCGCCA CGAATACCGC 
GCCAAGCGGT TGCAGTGCCC GTTCTGCCTG GAGAACGAAT CGAAGAATCT CGAATACTTC 
ACCGCCGACG GCGAACCCGG CTTTCAGGTG CACGTCTGCA CGTCGTGCAA GGGGTACATC 
AAGGTGGCGG ACTTCCGCGA ATTCGACCGC ATCTCCATCC CGGTGCTGGA CGACCTGGAG 
TCGCTGGCGC TGGACATCGT GGCGCGCCAG CAGGGTTACG CGCGGCCCAC GGCGTCTGCC 
TGGGGGTTCT GA
 
Protein sequence
MTFDFDRELQ RLEGKLKALR SKEYIPDALL EIVARTAAIQ LEARAAAQAG PLPELATPEA 
HAQGAPLLPR DAFTYDRART AATFGRLLAM MRAAGGSLGA AAEVVREAME KGELAVDDAC 
DAALRDDSAW FDAWALRLND APSLVRFLAM GSVVPSVEVL AQAVAAEQAR RTGADQPGAT 
PVVWQHGHCP VCGSAPLVGR LVGKEGALLH TCSFCRHEYR AKRLQCPFCL ENESKNLEYF 
TADGEPGFQV HVCTSCKGYI KVADFREFDR ISIPVLDDLE SLALDIVARQ QGYARPTASA 
WGF