| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DvMF_1189 |
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| Symbol | |
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| ID | 7173092 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011769 |
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| Strand | + |
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| Start bp | 1467361 |
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| End bp | 1468521 |
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| Gene Length | 1161 bp |
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| Protein Length | 386 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 643539699 |
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| Product | Radical SAM domain protein |
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| Protein accession | YP_002435609 |
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| Protein GI | 218886288 |
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| COG category | [H] Coenzyme transport and metabolism
[R] General function prediction only |
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| COG ID | [COG1060] Thiamine biosynthesis enzyme ThiH and related uncharacterized enzymes |
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| TIGRFAM ID | [TIGR00423] radical SAM domain protein, CofH subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 72 |
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| Fosmid unclonability p-value | 0.355638 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGCCG CCGCCAACGC CACCAACGCC CCCATCATGC CGGGCGGCTC GTCCCTTGGT
GAATCCGCGG ACGTACGCGC CGTGGCCGCA AAGGTGCTGG AAGGCCAGCG CCTTACCCGC
GCCGATGCCG ACCTGCTGTA CGACCACGCC GGGCTGCACA CCCTGGGGCA TCTGGCCCAC
GCCGTGCGCC TGCGCAAGCA TCCGCAGCCC GTGGTCACCT ACGTGGCCGA CCGCAACATC
AACTATTCCA ACGTCTGCGT GTGTGCCTGC CGCTTCTGCG CCTTTTTCCG CGCCCCCGGC
CACCCCGAGG GCTACGTGCT GAGCCGCGAG GAACTGGGCA GAAAGATAGA AGAAACCCTG
GCCCTCGGCG GCACCCAGAT CCTGCTGCAG GGCGGCCACC ACCCCGATCT GCCCCTGTCG
TTCTACGAAG GCATGATCGG CTGGATCCGC GACACCTACC CCGCCATCCA CATCCACGCC
TTTTCGCCGC CCGAGATCGT CTTTTTCGCG GAGCTCGAAA AGATCACCGT GGCCGAGGTC
ATCACCCGGC TGCGCGCCGC CGGACTGCAT TCCATCCCCG GCGGCGGCGC GGAAATCCTG
GTGGACGAAG TGCGCACCCA GGTTTCGCCC AACAAGTGTT CCGCCGCGCG CTGGCTGGGC
GTCATGGAAG AAGCCCACAC CCAGGGGCTG CGCACCACCG CCACCATGAT GTTCGGCCAC
GAGGAGCAGC CCCGCCACCG CCTGGACCAC CTGTTTGCCG TGCGCGAGGT GCAGGACCGC
ACCCACGGGT TCACCGCGTT CATCCCCTGG ACCTTCCAGC CCGCGCACAC CAACATCCAC
CGCGACCCGG AACCCGCGCC CGCCTACCTG CGGCTGCTGG CCCTGTCGCG CCTGGTGCTG
GACAACGTGG ACAACGTGCA GGCTTCGTGG GTGACCATGG GGCCGCAGGT GGCCCAGCTG
GCCCTGTACT TCGGCGCCAA CGACTTCGGC TCGCTCATGA TCGAGGAAAA CGTGGTGGCC
GCCGCAGGCG TCAGCTTCAG CCTCTCGCGC CGCGAAATCC ACAACTGCAT CCGCGCCGCC
GGGTTCACCC CCGTGCAACG CACCATGAAC TACACCCCCG TGTCGCCCCA ACCCGTGGTG
GAAGGGGAAA TACAGGGGTA A
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| Protein sequence | MSAAANATNA PIMPGGSSLG ESADVRAVAA KVLEGQRLTR ADADLLYDHA GLHTLGHLAH
AVRLRKHPQP VVTYVADRNI NYSNVCVCAC RFCAFFRAPG HPEGYVLSRE ELGRKIEETL
ALGGTQILLQ GGHHPDLPLS FYEGMIGWIR DTYPAIHIHA FSPPEIVFFA ELEKITVAEV
ITRLRAAGLH SIPGGGAEIL VDEVRTQVSP NKCSAARWLG VMEEAHTQGL RTTATMMFGH
EEQPRHRLDH LFAVREVQDR THGFTAFIPW TFQPAHTNIH RDPEPAPAYL RLLALSRLVL
DNVDNVQASW VTMGPQVAQL ALYFGANDFG SLMIEENVVA AAGVSFSLSR REIHNCIRAA
GFTPVQRTMN YTPVSPQPVV EGEIQG
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