| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DvMF_1184 |
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| Symbol | |
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| ID | 7173087 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011769 |
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| Strand | + |
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| Start bp | 1461889 |
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| End bp | 1463448 |
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| Gene Length | 1560 bp |
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| Protein Length | 519 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 643539695 |
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| Product | phosphodiesterase |
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| Protein accession | YP_002435605 |
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| Protein GI | 218886284 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1418] Predicted HD superfamily hydrolase |
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| TIGRFAM ID | [TIGR00277] uncharacterized domain HDIG
[TIGR03319] conserved hypothetical protein YmdA/YtgF |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 66 |
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| Fosmid unclonability p-value | 0.105071 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGGCTCA TCGAAATCAT CTACGTCGTC GTGGGAGCGA TCATCGGCGC GGCATCGGGC
TATGCCCTGC ACCGCTACAT CAGCTCCAAG CGCATCGCCG ATGCCAACGA ACTCGCCAAG
CGCATCGTCG AGGAAGCCCG CAAGGAAGCG CAGGCCCAGA AGAAGGAAAT TCTGCTCCAG
GGCCAGGACG AAATCTTTCA CCAGAAACGC GAACTGGAAC ACGAGTTCAA GGAACGCGAG
CGCGAACTGA AGGCGCGTGA CCGCAAGATG CAGGAACAGG GCGAACGCCT GGAGGAAAAG
CTCGAAAAGG CCACCGAAAA GGAGCACGAA GTGCTGGCCG CCGAAAAAGA GCTGACCCGC
CGCGAACGTC ACCTGGCCGA CATGGAGGAA CAGATTTCCT CCCGCATCGA TGAACAGGAA
CGCCGCCTCC AGGAAATATC CGGCCTGACC GCCGAAGAGG CGAAGTCGCG TCTTTTCGAA
GACATCGAAT CGCGCACCCG CCACGAAGCC GCCAAGATGA TCCGGCTCAT CGAAACCGAG
TCGAAGGAAA CCGCCGACCG CAAGGCCAAG GAAATCATCG CCAACGCCAT CCAGCGCTAC
GCGGGCGACT ACGTGGGCGA GCAGACGGTG ACCGCCGTGA CCCTGCCCAG CGAAGACATG
AAGGGCCGCA TCATCGGTCG CGAAGGGCGC AACATCCGCG CGCTGGAAGC GGCCACCGGC
GTGGACCTGA TCATCGACGA CACCCCGGAG ACGGTCATCC TTTCCGCCTA CAGTCCGTTG
CGCCGCCAGG TGGCCAAGAT GGCCCTGGAA CGGCTGATCC AGGACGGGCG CATCCACCCC
GCGCGCATCG AGGACATCGT GCGCAAGTGC GAGCAGGAGC TTGATGTGCA AATCCGCGAG
GTGGGCGAAC AGGCCACCTT CGACGCGGGC GTGCACGGCA TCCATCCCGA CATCGTGCGC
CTGCTGGGTC AGCTGAAGTA CCGCACCAGC TTCTCGCAGA ACGTGCTGCA ACACTCGCTG
GAAGTGGCCG CCCTGTGTGG CATGATGGCC GCCGAACTCG GCATGGACAT CAAGAAGGCC
AAGCGCGCGG GCCTCTTGCA CGACATCGGC AAGGCCGTGG ACCACGAGGT GGAAGGGCCG
CACGCCATCA TCGGCGCGGA CATCGCCAAG AAGTACAACG AGAGCAAGGA AATCATCCAC
GCCATCGCCG CCCACCACGA GGACACCCCG CCCAAGTCGG CCCTGGCCGT GCTGGTGCAG
GCCGCCGACG GCCTGTCCGG CGCCCGCCCC GGCGCCCGCA AGGAACTGCT GGAAAACTAC
GTGAAGCGGC TGGAAGACCT GGAGAACATC GCCACCGGCT TTGAAGGCGT GGCCAAGGCC
TACGCCATTC AGGCGGGCCG CGAGATCCGG GTCATGGTCA ACTCCGACAA CGTGGACGAC
GACCAGACCT ACATGCTGTG CAAGGACATT GCGGGCAAGA TCGAAAAGAA CCTGACCTAC
CCCGGCCAGA TCCGGGTCAC GGTCATTCGC GAACGCCGCG CCGTGGGCTT CGCCAAGTAG
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| Protein sequence | MGLIEIIYVV VGAIIGAASG YALHRYISSK RIADANELAK RIVEEARKEA QAQKKEILLQ
GQDEIFHQKR ELEHEFKERE RELKARDRKM QEQGERLEEK LEKATEKEHE VLAAEKELTR
RERHLADMEE QISSRIDEQE RRLQEISGLT AEEAKSRLFE DIESRTRHEA AKMIRLIETE
SKETADRKAK EIIANAIQRY AGDYVGEQTV TAVTLPSEDM KGRIIGREGR NIRALEAATG
VDLIIDDTPE TVILSAYSPL RRQVAKMALE RLIQDGRIHP ARIEDIVRKC EQELDVQIRE
VGEQATFDAG VHGIHPDIVR LLGQLKYRTS FSQNVLQHSL EVAALCGMMA AELGMDIKKA
KRAGLLHDIG KAVDHEVEGP HAIIGADIAK KYNESKEIIH AIAAHHEDTP PKSALAVLVQ
AADGLSGARP GARKELLENY VKRLEDLENI ATGFEGVAKA YAIQAGREIR VMVNSDNVDD
DQTYMLCKDI AGKIEKNLTY PGQIRVTVIR ERRAVGFAK
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