| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DvMF_1148 |
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| Symbol | |
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| ID | 7173049 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011769 |
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| Strand | + |
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| Start bp | 1408259 |
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| End bp | 1410103 |
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| Gene Length | 1845 bp |
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| Protein Length | 614 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 643539659 |
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| Product | TrkA-N domain protein |
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| Protein accession | YP_002435570 |
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| Protein GI | 218886249 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0569] K+ transport systems, NAD-binding component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 72 |
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| Fosmid unclonability p-value | 0.549431 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATTCC TGCCCTCGCA GATCGCCTTT TTCATGCAGA GCCGCTCGGC CCAGCGCAAC
ATGCGCTTCC TGTTCCGCTT CGTGCTGCTG CTGGTGGCGG TCATCACGCT GTACAGCGTG
CTGTTCCACG TCATCATGGA CTACGAGGGG CGCGACTACT CGTGGGCCAC GGGCTTCTAC
TGGACGCTCA CGGTCATGTC CACGCTGGGT TTCGGAGACA TCACCTTTCT CAGCGACACG
GGCAAGCTGT TCACGCTGGT GGTGCTGCTT TCCGGCATCA TCTTCCTGCT GGTGATGCTG
CCGTTCACCT TCATCCAGTT CTTCTACGCG CCGTGGCTTG AAGCGCAGAC GCGCCTGCGC
GCCCCCCGTG AACTGCCAGC CGAAACGCGC GACCACGTGA TCATCGTGGG CGGCGACGCC
ACGGCCCTGG GCCTTGGGCG CGACCTGGCC CAGTATGCCC ACCCCTACGT GCTGCTGTGC
GCCGATGCCC AGACCGCGCT GGACTTGCAG GACCAGGGGT TTTCCGTGGC CGTGGGCGAT
TACGACGACC CGGAAACCTA CCGGCGGTTG CGCGTGGAAC AGGCAGCCAT GCTGGTGGCC
CTGGACGGCG ACGTGCGCAA CACCAACGTG GCTTTCACCG CGCGAGAGGC CAGCCCCGGC
ATACCCGTGG TCTGCGGGGC CGACCAGGAC GAGGCCGTGG ACATCCTGAC CATGGCGGGC
GGCACCCACG TGTTCCGGTT TTCCAGCATG CTGGGCCAGG GCCTTGCCCG GCGCACCCTG
GCCGGACACA TGCGCACCGG CGTGGTGGGC CGCTTCGACG ACCTAGTGGT GGCCGAGGCC
CCGGTGATGC GTACCGGCCT GGTGGGCCAT TCGCTGCGCG ACAACGACCT GCGCAAGGTC
ACGGGCGTCA ACGTGGTGGG GGTGTGGGAA CGGGGGCGGT TCCAGTTGCC GCGCCCGGAC
GCGCCGCTGG AGGCCAGCAC CGTGCTGGTG CTGGCGGGCA CGCGCCAGCA GATGGACGCC
TTTGACCGCT ATATCGGGGG GCGCGGCGTG AACGACGCGC CGGGCGGAGC AGGCGGAGCG
GGCCCGACTG GCGGAGCGGG CATGACGGGC GTGACTGGCG AAATTGGCGA GACGGGCGAA
GCGGGCCGTC ATGACCGGGC GGGCGGAACA TCCACCTCCC CCGCATCCGA CACGCCGGTG
CTCATTCTGG GTGGCGGGCG CGTGGGGCTG GCCGCGGCGC GGCAGTTTGC GGAAACTGGC
ATCGACTACC GCATCGTGGA GAAAAACCCC CGGCTGGTGC ACGACAACGT CCACACCATC
ACCGGCAGCG CCGCCGACCT CGACGTGCTG GAGCGCGCGG GCATCCGCGA GGCCCCCGCC
GTACTGGTCA CCACCCACGA CGACGACCTG AACATCTACC TGACCATCTA CTGCCGCAGG
CTGCGGCCCG ACATCCAGAT CATCTCCCGC GCCACGCTGG ACCGCAACAT AGGCATCCTG
CACAAGGCCG GGGCGGACCT GGTCATGTCG CACGGATCGC TGGTGTCCAA CACGGTGATC
AACCTGCTGA ACCCCGGCAA GGTGCTGATG CTCAGCGAAG GGCTGAACAT ATTCCGCGCC
CCGGTGGGGC TGGGCCTTGC CGGACGCACC CTGAAGGACA GCGGCATCCG CGACGAGACC
GGGTGCAGCG TGGTGGCCCT GCGCGGGCCG GGCGGCCTTT CCGTCAACCC GGACCCCACC
CTGCTGCTGC GCGCCTGCGA TGAACTGATC CTGATTGGCG ACTCCGAGGC CGAACGGCGC
TTTCTGGAAC GCTACCCCGA CGATGAGGAA TGCGAAGAAG CGTAA
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| Protein sequence | MKFLPSQIAF FMQSRSAQRN MRFLFRFVLL LVAVITLYSV LFHVIMDYEG RDYSWATGFY
WTLTVMSTLG FGDITFLSDT GKLFTLVVLL SGIIFLLVML PFTFIQFFYA PWLEAQTRLR
APRELPAETR DHVIIVGGDA TALGLGRDLA QYAHPYVLLC ADAQTALDLQ DQGFSVAVGD
YDDPETYRRL RVEQAAMLVA LDGDVRNTNV AFTAREASPG IPVVCGADQD EAVDILTMAG
GTHVFRFSSM LGQGLARRTL AGHMRTGVVG RFDDLVVAEA PVMRTGLVGH SLRDNDLRKV
TGVNVVGVWE RGRFQLPRPD APLEASTVLV LAGTRQQMDA FDRYIGGRGV NDAPGGAGGA
GPTGGAGMTG VTGEIGETGE AGRHDRAGGT STSPASDTPV LILGGGRVGL AAARQFAETG
IDYRIVEKNP RLVHDNVHTI TGSAADLDVL ERAGIREAPA VLVTTHDDDL NIYLTIYCRR
LRPDIQIISR ATLDRNIGIL HKAGADLVMS HGSLVSNTVI NLLNPGKVLM LSEGLNIFRA
PVGLGLAGRT LKDSGIRDET GCSVVALRGP GGLSVNPDPT LLLRACDELI LIGDSEAERR
FLERYPDDEE CEEA
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