Gene DvMF_1106 details

Gene Information

• Locus tag: DvMF_1106
• ID: 7173007
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Desulfovibrio vulgaris str. 'Miyazaki F'
• Kingdom: Bacteria
• Replicon accession: NC_011769
• Strand: +
• Start bp: 1355112
• End bp: 1356917
• Gene Length: 1806 bp
• Protein Length: 601 aa
• Translation table: 11
• GC content: 69%
• IMG OID: 643539617
• Product: phage uncharacterized protein-like protein
• Protein accession: YP_002435528
• Protein GI: 218886207
• COG category: [R] General function prediction only
• COG ID: [COG5362] Phage-related terminase
• TIGRFAM ID: [TIGR01630] phage uncharacterized protein (putative large terminase), C-terminal domain

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 67
• Fosmid unclonability p-value: 0.139903
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGCCAGCCC CTCCCATGAT TCCACCCGCA GCCGCCATGC CCACCACCCG GCGCGATACC 
GCCGCCCTGT ACGCCGACCT TGCCGCAGAC GCCACCCGTA GCGGCCCCGC CGCACTGGCC 
GCCGTGCAGG CGGAGCTTGG CCGCCGCGAC CTGTTCTACC TGCTCACCCG GCTCATGAAC 
CGGACCGACA TGGACCGCGA CTGGCTGTTC GAACGCTGCC GCGAGGTTCA GGCCGCGCCC 
GACGGCCACC TGGACCTGTG GGCGCGCGAA CACTACAAAT CCACCATCAT CACCTTCGGC 
CAGACCGTGC GCGACATCCT GAACGACCCG GAAATCACGG TGGGCATCTT TTCCCACTCG 
CGCCCGGTGG CCAAGGACTT CCTGGGCCAG ATCAAGCACG AGTTCGAACA CAACGACCTG 
CTGAAGCGCC TGTACCCCGA CGTGCTGTGG GCCGCGCCCC GGCGGCAGGC CCCGGTGTGG 
TCGCTGGACA AGGGCATCGT GGTGCGCCGC CGAGGCAACC CCAAGGAGGC CACCGTGGAG 
GCGTGGGGAC TGGTGGACGG CCAGCCCACG GGCAAGCACT TTCGCCTGCT GGTCTACGAC 
GACGTGGTTA CCCGCGACTC CGTGACCACC CCGGAAATGA TCGCCAAGGT CACGGAATGC 
TGGGCCCTGT CGCTCAATCT GGGGGCCAGC GGGGTGACCG GCGAAGACCG TGGCGGAGGC 
CGTGCCGGGA ACAGCGGCGG AGATGCCCGC GGGAAGACGG GAAACAAAAA CGGTGCCGCG 
GCCCCTGCGG ACGACACGGG GCTGGCCGAC GGCGCGACCG CCCCCGCGCC TGCGGATGCA 
GACAATGCCC TGCCCGCCAG CGGGGCGGGA CGCCGCCGCT ACATCGGCAC CCGCTACCAC 
TTCAACGACA CCTGGCGCAC CATCCTCGAA CGAAGGGCGG CAACGCCGCG CATCCACCCC 
GCCACGGCCA CCGGTGCCCC AGATGGCCCG CCAGTGCTGC TTTCCCCGGC GGCGCTGGCC 
GAAAAACGCC GCCAGATGGG GCCGTACGTG TTCGGCTGCC AGATGCTGCT GAACCCCGCC 
GCCGACACGG CCCAGGGCTT CCGCGCCCAA TGGCTGCGCC GCTACGCGTC CGATGCGGGC 
AACGGAGCCG ACCACGGGCG CGCATCCCCC CTGGCCCGCT GGGGCCACTG CAACCGGTAC 
CTGCTGGTGG ACCCGGCGGG CGAACGCAAG AAGGGCAGCG ACTACACGGT AATGCTGGTG 
GTTGGGCTGG CCCCGGACGG CAACCGCTAC CTGCTGGACG GGGTGCGCGA CCGGCTGAAC 
CTTACGGGCC GGGCCGCCGC GCTGTTCCGC CTGCACCGGA CATGGCGGCC ATTGGCCACA 
GGCTACGAAA AATACGGCAT GCAGGCCGAT ATCGAACACG TGCGCACCGA ACAGGAACGC 
CGCAACTACC GCTTCGACAT CACCCCGCTG GGCGGCCCCA TGCCCAAGAA GGACCGCATC 
CGCAGGCTGG TGCCGGAATT CGAGCAGGGC CGCATGCTGC TGCCGCACCG CCTGCCCTTC 
GTGGATGCCG AGGGCAAACG GCGCGACCTG GCGCGGGAAT TCGTGGACGA GGAGTATCTG 
GCCTTTCCCG TGTCCCGGCA TGACGACATG CTGGACTGCC TGGCCCGCAT TCTGGACCCC 
GACCTGGGCG CGGAATTCCC AGACCCGGAT TCCGGAGGGT TCGGTCCGGC AGGGCACGGC 
GCAGGCCATG GCGACCTTGG CTGCACGGAC GACACCGCGC ATATGGAGTA TCCCCTGTAT 
GGCTAG 

 

Protein sequence

MPAPPMIPPA AAMPTTRRDT AALYADLAAD ATRSGPAALA AVQAELGRRD LFYLLTRLMN 
RTDMDRDWLF ERCREVQAAP DGHLDLWARE HYKSTIITFG QTVRDILNDP EITVGIFSHS 
RPVAKDFLGQ IKHEFEHNDL LKRLYPDVLW AAPRRQAPVW SLDKGIVVRR RGNPKEATVE 
AWGLVDGQPT GKHFRLLVYD DVVTRDSVTT PEMIAKVTEC WALSLNLGAS GVTGEDRGGG 
RAGNSGGDAR GKTGNKNGAA APADDTGLAD GATAPAPADA DNALPASGAG RRRYIGTRYH 
FNDTWRTILE RRAATPRIHP ATATGAPDGP PVLLSPAALA EKRRQMGPYV FGCQMLLNPA 
ADTAQGFRAQ WLRRYASDAG NGADHGRASP LARWGHCNRY LLVDPAGERK KGSDYTVMLV 
VGLAPDGNRY LLDGVRDRLN LTGRAAALFR LHRTWRPLAT GYEKYGMQAD IEHVRTEQER 
RNYRFDITPL GGPMPKKDRI RRLVPEFEQG RMLLPHRLPF VDAEGKRRDL AREFVDEEYL 
AFPVSRHDDM LDCLARILDP DLGAEFPDPD SGGFGPAGHG AGHGDLGCTD DTAHMEYPLY 
G