Gene DvMF_1052 details

Gene Information

• Locus tag: DvMF_1052
• ID: 7172953
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Desulfovibrio vulgaris str. 'Miyazaki F'
• Kingdom: Bacteria
• Replicon accession: NC_011769
• Strand: +
• Start bp: 1284844
• End bp: 1289943
• Gene Length: 5100 bp
• Protein Length: 1699 aa
• Translation table: 11
• GC content: 73%
• IMG OID: 643539564
• Product: multi-sensor hybrid histidine kinase
• Protein accession: YP_002435475
• Protein GI: 218886154
• COG category: [T] Signal transduction mechanisms
• COG ID: [COG0642] Signal transduction histidine kinase

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 83
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGTCGCACG CCCCGACCAT CGCTTCGGCC CCCTGCTCGC CCCGCGTCCC GTCACTTCAT 
ACATATACAT CCCGCCACCG CACCGTGCTG TTGCAAATGG CCGCATGGCT GCTGCTGGCC 
TGTTGCCTTG CGCCGTGGCC GCCCATCATT GCGCATGCCG CCACGGCGGC TCCCGCCGCC 
GCCAATGCGA CACGCCCCGA GGCCACTCCT CCAGCCGCCG CGCCAGCGCT TTCCAACGCC 
ACCCGGGCGC TGGATACATC GTCTCTGCTG GCCACCCAAC CGCTGACCCC GTTCATGGAA 
TTTCTGGTGG ACCCCACCGG CACGCTGAGC GTGGATGAAC TGCTCTCGCC CTCGCACCAG 
GCCGGGTTCA CCCCGCTGGG TAACGGCCTG CCCCTGTTCC GCTCCGGCTC CACCTGGCTG 
CGCATGACCC TGGCCCCCCG CCCCTCGGAC GGGCAAAACC GCCAGTTGCT GCTGGACATT 
GGCCGCGACC TGCCCGGCAA CGCCACGCTG TTCCTGGCCA AACGCAATCA GCCCGGTGAA 
CCCAACGAAT GGCAGGCACA GTCCCCCGAA GGGGGCAACG TGTTCACCCT GCCCGACCCC 
GTGGGCAAGC CCCTGCCCGT CTACGTAAAG CTGGACGGCG TGCCGGGGCC GTGGTTCGCG 
CCCATGCTGC GCACCCCCCA GAATGCCGCC GCCAACAACG ACGGACTGGC CCGCCCGCTG 
GTGATCGGCG TGCTGGTGGC CGTGCTGGCC CTGTGCCTGC TGCGCGGTGT CTTCGAGCGG 
GGCGAATGGC GGTTGTGGAC CAGCCTGTTC GTTGCCGCCG TACTGGCCCA GGCCGTGGCA 
GGGCAGCCGC CCACGCCCGC CGGATACGTG CCGTTGCGCG GCCTGCCCGG CGTGCTGGCC 
CCCGGCCTTG CCCTGATGCT GCTGCCCCAC GTGGGGCGCC ATCTGCTGCG CACCCGCGAA 
CACGCGCCCA GCGCGGACAT GCAGTTGCGG GTGGTCTCGC TGGCCGGGGC CGTTCTGGCC 
CTGCTGCCGC TGGCGCCGGG CATGGCCTGG TCCTCGCGCC TGCTGGCGCT GTGGCCGCTG 
CTGCTGGTGC TGCTGCTGCC CGCCGCCGTG GCCTGCAAAT TCCGCAAGCT GCCGGGGTCG 
CGCCGTTTTC TGACCGGATG CGTGGCCGCG CTGATCGGGG CCGGGGTGGG CATTGCAGGA 
CTGGCATCGC CGGTGCCCGC CGTGTGGATT TCCACCGCTC CGCTGTGGGG CCTGGCCCTG 
CTGGCCCTGC TGGTGGCAGG CACCAGCGCG CCGCGCCCGA CCGAGGCCGA GGGCTCCCTG 
ACCGGCGGAC GCGGCTACCG CGTGCGCAAG AGCCCGGCGG CGGAACGTCC CGACCTGGAC 
GACCCGCTGG CCGACGAGCC CACCCTGCGC ATGATCTCGC CCGAAGAACT GCGCGGCGGG 
CTGGCCCCGT CTCCGCGCAC ACCCGCCGCG CTCGCCACCG GGGACGCGCT GCCCCCTGAC 
GAAGCCACCG CCCGCCAAGG CTCCGGCCAT GACGACAGCA TGGCCGACGA GCCGTTGGAA 
CTTTCCCTTG GCGACGTGCT GCCGGAACTG GACGGCACCC CCATGACGCG CGGCTCGCGC 
CGCCTTGCCC GCGCGGCGGC CATGGCCGGA CGGGCCGACT CCTCCACGGG TTTCGCCGCT 
GGCGGTGACG ACGGAAACGA GGGGGAGGCC TTGCCCCACA CCGGTTCCGG CCTTGATCCG 
CTGGCACTGG CCCGCATGGA GGAAGCCCTG CTGGCCCCCA TCGACGCCAT GTTGCAGGAA 
CTGGACGGCC TGGAAAACTG CGCGCTGCCC CCCGCCGCCC GCAGCCATGC CGAGGCCGTG 
GGCGCCGCCG GGCGCCAGTT GGCCTCCATT GCAGAGGACC TTGGCCGGGT GGCCGCGCCG 
CAGCGCAACG CACCGCGCAG GGCCGTGTTC GACCTGCAAC GCATGCTCCG CGACGCCCAC 
GATGCCGTGG CCGACCGGGC GGAACGCAAG GGCCTGGCCA TCTCGTGGTT CATGGCGCCG 
CATCTTTCGC AGCTGTATGA AGGGGACGCG GGGCAACTGG GCGAACTGCT GCGCCTGCTG 
GCCGAAAGCT CGATGCGTTC CACGGACAAG GGTTCGGTGC ACATGTCGGT GCGCCGCGTG 
CCCGACAGCA CGGACCCCGG CCACCTGCTG TTCACCGTCA GCGATTCCGG CGCGGGCGCG 
CCGCCGCACA AGCGCAGCGT CAGCGCACTG GCCCGGGCGT GGGAAATGGC CGACGCCGCC 
GGGGGCACCC TGACCGTGGA AAGCGGGCGG GGCCAGGGCA CCACCATTTC GTTCACCGCG 
CGGCTGGTGG CCCTTTCGGG CGATGCCACG GCGCCGCGCC CCTTCGTGGG CGTGGACCTG 
ACCGACGACC TGCGCGTGGC CCGCCCCATG CCCGACGCCG TGACGGCGGC GGACCACCTG 
CACCTGGGGC CGGTGGCCCC GCACCGTCCG TTGCAGGTCA TCGTGGCCGA CGACGTGCCC 
AGCAACCGCC AGTTGCTGGC CTTTTTCCTG GAAGGGCTGC CCCATGCCCC GCTGGAGGCG 
CGCGGCGCCA CCGAAGCGGG CATCCTGTAC CGGCGCGCGC CCTCGGGCCT GATCATCATG 
GACGGCGACA TGCCCGAGGA CGACATCGTG GCCGCCCTGG CGTCCATCCG CGCCTTCGAG 
CAGGAGCACG GACTGCCCCC GGTGCCGGTG CTGGCCCTTG TGTCGCACGA GGCGCAGGCC 
GAGCGCATGC TGGCCGCCGG GTGCACCGAA ACGCTGGAAA AGCCCCTCAC CCGCAGCGGC 
CTGCGCGCCG CCGTGGAACG CCTGGCACCG CCCCATGCCG AACCGGAACC GCAGCCCGAA 
TACGCGGACT ACGCCGGATA CGGGGCTGCC GCAGCGGAAC TGCCGCACGG CGAGGAAGGC 
GACGACGCCC GCGCCACGCC GCCGGAATTC GCGGAACTGC CGGACCTGTT CCTGTCCGCT 
GCCGATAACG GCGCGGATGC CGGTGCTGCT GGTCATGTCG GTCATGTCGG CCATGCCGGG 
TCAGACGGGC CTTCGCTGGC CGGGGATGCC GCCCCGGCGT GGGATGCCCC CGAAACCACG 
CGGGACGACG CCTCTCCATC TAACGCCCCG ACGTACCCCC ATGACGATTC GGCCATGGAT 
GCGCTGCCTG AATTGCTGGA CGAGGGGTTT GCGCCCAACG CGACCGAGGC CGACGCGGGT 
GCGCCGCATG AGGCCGCAGC CGACGCGCCT GTGCCAGCCG AGCCTGTGCC TGCCGAGCCC 
ACGTCGTGGC ATCCCTGGGA CCGCCCGGTG GCCGGAACGC AGGTGGCCGG GGCACCGGAA 
CCGGCACCGC ACGCGGCGGA CAACGACGGC GGCAACGCCG ACGCCGCCCA CGCCATGACC 
CATGAGGAAG AATCGAACGA GGCCGAAGAG TTGCCTGACC TGTTCGGCGC GGACATCTTT 
GCCGTGGGCC ACGCCGACCC CGCCGCAGGG CAGCAGCCCT CGGCGTCCGG GGGGACCGCC 
ACCAGCGTAG CGCACGGGAA CGGCGTGCTG CCCGAGGGAG GATCGCTGCT GGACCTCATC 
GTCGCCGACG CCGAGGATTC CGAACCTGGC GCCGATGCCC CGACCGCATC GGGCCAAGCA 
CCGGCAGCGC CAGCCCCAAC GCCCCCGGCC TCGCCCCTTG TCGCAGGGGC CGCCGCCACT 
GTCGCGGCTG CGGCAACGTC CACGGAGATG GCCCCCCCGG CCTGGGACGA CAATTTTGAG 
GAATCCGTGG GCGCCCCCAC GCCCGTGAAG ACCGCCCCGG CCCAGCCGGT TGCGGGTGCT 
GCTGCCGCCA CAGCCCGGCA GGAGCGCGCC GACGCGCATC CCGAAAACGC GGCCACTGCG 
GTGCGCAAGC CCACCGCCCC CGCCGACGGC GGTGAATGGG TGGGCGACCC CATGCCCATG 
GAACCGCACC GGTCCACCGC CCATGCAGGG GCCAGCGCCT CTTCGTCCTA CGGGGCGGCG 
GCGCGCCTGG AACGCTGGGA ACGCGCCCAG CGAGCCCAGC AGCAAGGGCA ACGCCCCGTG 
CCCCACCCGT TGCCGGAGCA AAGGGGGCAA CAGGTTGCGG AACAGGCCCC GGCCCTTCCG 
CAGCCCGATA CCCGGCCCAT CCGCGACCTG TCGGCTGAAG TGCGTCCCGG TTACCGTCCC 
AAGCCGCCCG CCGGGCAGGT GACGACCGGA CCGGCGCAAC CCGGACAAGC GCAGCCCGGC 
CAGACACAGG CTGGACAGGC ACAGCCCGGA TTGGCGCAGC CCGGATTGGC GCAGGCTGCC 
GCGTCGACTG CCCAGGGTGG CCAAGGCGCC CAGACTGGCC GGACTGCCCA GACTGGCCCG 
GCTGTTCCGG CGTGGCCCGC CGGACAGCAG ACCGGCCCGA CCCTGCCGCC GCAAATGCAG 
TACACCAGGC CCCAGTCGGG GCAGCAGGCC CCCCCGACGC CCCCCGTACA GGTTTCACCC 
GGACAAGTTT CATACGGTCA GGCCGCGCAC GCTTCGCCGC ACTCGCGGGC AGCCACGCCG 
CCGCAAGCCG CCCCCGCCAA GAGCTTTGCC GAACGCATCG CGGAACGCAT CGCCGTGCAC 
CTTGGCCGTG GCGCGGACCG CGCCAGAAGT CCGGAAGACG ATGCGACGCG GCGTGCCCCG 
TCGCAGGCAG CCCCGTCCCA GCCCGCCAGG TCCGGCGCCG CACCGGCGCG CCCGGCTTCT 
CCCGTTCCGC CCGTTACTTC TGGCGGTCGG CGGACAGAGC CGCACATGAA CATGGGCGAC 
GACATCGAGC CCTTTATCCC CGGCCTGCTG GAAACCCTGG ATGCCGCCCT GGACGATGCC 
CGGCGCGGTC GGGCCGACGG CAGCACCTTT GCCGTGCAGG AAGCGGCGGC GCGCATCGCG 
GGCAAGGCGG AAAGCTTTGG CCTGCGGGTG CTGGAACGCA TTGCCCGCTG CGTGGAACGG 
GCCGCCACCG CCGACGACAT GGAAGCGGTG CGCGACCTGC TGCCCGAACT GGAGGCCGCG 
GTGGAACGCA ACCGCATCGC CCTGGCCCCG CGCGTCGGGC AGGCCGCTCG CCGGGGCTGA 

 

Protein sequence

MSHAPTIASA PCSPRVPSLH TYTSRHRTVL LQMAAWLLLA CCLAPWPPII AHAATAAPAA 
ANATRPEATP PAAAPALSNA TRALDTSSLL ATQPLTPFME FLVDPTGTLS VDELLSPSHQ 
AGFTPLGNGL PLFRSGSTWL RMTLAPRPSD GQNRQLLLDI GRDLPGNATL FLAKRNQPGE 
PNEWQAQSPE GGNVFTLPDP VGKPLPVYVK LDGVPGPWFA PMLRTPQNAA ANNDGLARPL 
VIGVLVAVLA LCLLRGVFER GEWRLWTSLF VAAVLAQAVA GQPPTPAGYV PLRGLPGVLA 
PGLALMLLPH VGRHLLRTRE HAPSADMQLR VVSLAGAVLA LLPLAPGMAW SSRLLALWPL 
LLVLLLPAAV ACKFRKLPGS RRFLTGCVAA LIGAGVGIAG LASPVPAVWI STAPLWGLAL 
LALLVAGTSA PRPTEAEGSL TGGRGYRVRK SPAAERPDLD DPLADEPTLR MISPEELRGG 
LAPSPRTPAA LATGDALPPD EATARQGSGH DDSMADEPLE LSLGDVLPEL DGTPMTRGSR 
RLARAAAMAG RADSSTGFAA GGDDGNEGEA LPHTGSGLDP LALARMEEAL LAPIDAMLQE 
LDGLENCALP PAARSHAEAV GAAGRQLASI AEDLGRVAAP QRNAPRRAVF DLQRMLRDAH 
DAVADRAERK GLAISWFMAP HLSQLYEGDA GQLGELLRLL AESSMRSTDK GSVHMSVRRV 
PDSTDPGHLL FTVSDSGAGA PPHKRSVSAL ARAWEMADAA GGTLTVESGR GQGTTISFTA 
RLVALSGDAT APRPFVGVDL TDDLRVARPM PDAVTAADHL HLGPVAPHRP LQVIVADDVP 
SNRQLLAFFL EGLPHAPLEA RGATEAGILY RRAPSGLIIM DGDMPEDDIV AALASIRAFE 
QEHGLPPVPV LALVSHEAQA ERMLAAGCTE TLEKPLTRSG LRAAVERLAP PHAEPEPQPE 
YADYAGYGAA AAELPHGEEG DDARATPPEF AELPDLFLSA ADNGADAGAA GHVGHVGHAG 
SDGPSLAGDA APAWDAPETT RDDASPSNAP TYPHDDSAMD ALPELLDEGF APNATEADAG 
APHEAAADAP VPAEPVPAEP TSWHPWDRPV AGTQVAGAPE PAPHAADNDG GNADAAHAMT 
HEEESNEAEE LPDLFGADIF AVGHADPAAG QQPSASGGTA TSVAHGNGVL PEGGSLLDLI 
VADAEDSEPG ADAPTASGQA PAAPAPTPPA SPLVAGAAAT VAAAATSTEM APPAWDDNFE 
ESVGAPTPVK TAPAQPVAGA AAATARQERA DAHPENAATA VRKPTAPADG GEWVGDPMPM 
EPHRSTAHAG ASASSSYGAA ARLERWERAQ RAQQQGQRPV PHPLPEQRGQ QVAEQAPALP 
QPDTRPIRDL SAEVRPGYRP KPPAGQVTTG PAQPGQAQPG QTQAGQAQPG LAQPGLAQAA 
ASTAQGGQGA QTGRTAQTGP AVPAWPAGQQ TGPTLPPQMQ YTRPQSGQQA PPTPPVQVSP 
GQVSYGQAAH ASPHSRAATP PQAAPAKSFA ERIAERIAVH LGRGADRARS PEDDATRRAP 
SQAAPSQPAR SGAAPARPAS PVPPVTSGGR RTEPHMNMGD DIEPFIPGLL ETLDAALDDA 
RRGRADGSTF AVQEAAARIA GKAESFGLRV LERIARCVER AATADDMEAV RDLLPELEAA 
VERNRIALAP RVGQAARRG