Gene DvMF_1030 details

Gene Information

• Locus tag: DvMF_1030
• ID: 7172926
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Desulfovibrio vulgaris str. 'Miyazaki F'
• Kingdom: Bacteria
• Replicon accession: NC_011769
• Strand: +
• Start bp: 1250773
• End bp: 1251216
• Gene Length: 444 bp
• Protein Length: 147 aa
• Translation table: 11
• GC content: 62%
• IMG OID: 643539537
• Product: hypothetical protein
• Protein accession: YP_002435453
• Protein GI: 218886132
• COG category: [N] Cell motility; [U] Intracellular trafficking, secretion, and vesicular transport
• COG ID: [COG4968] Tfp pilus assembly protein PilE
• TIGRFAM ID: [TIGR02532] prepilin-type N-terminal cleavage/methylation domain

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 70
• Fosmid unclonability p-value: 0.163763
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGACCCAGA GCAAGATGGA CCGAAAGAAG GAACAGGGCT TCACCCTCAT CGAAATCATC 
GCCGTGCTGG TCATCCTCGG CATTCTCGCC GCCGTGGCCG TGCCGCGCTA TTTCGACCTC 
GCCAACCAGG GTGAAGAACG TGCCGTACGC GCGGCGGCCG CGGAAGTGCA AGCCCGCATC 
AATAACCTGT TCGCGCAGCA ACTCATTGCT TCCAATGGTG CATGCGGAAC GGCTGTCGGT 
GCCATGACCT ACGAGGCCCT GACCGACGAT GGCGCGGCAA CCGCTGGCGG CACCATCGGC 
GGCTGGACCA TCACCGGCCT GAGCAACACC GAACTGCGGA CCCAAGGTGC TGTGACCCCC 
ATCACGGCGG CGCAGGGCAA CATCGACAGT TCTACTCTGA CCCTCGCCCC CGTGTTGTCT 
GTTCGTTCGC CCAGTTGCAA CTAA 

 

Protein sequence

MTQSKMDRKK EQGFTLIEII AVLVILGILA AVAVPRYFDL ANQGEERAVR AAAAEVQARI 
NNLFAQQLIA SNGACGTAVG AMTYEALTDD GAATAGGTIG GWTITGLSNT ELRTQGAVTP 
ITAAQGNIDS STLTLAPVLS VRSPSCN