| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DvMF_1029 |
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| Symbol | |
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| ID | 7172925 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011769 |
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| Strand | + |
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| Start bp | 1249389 |
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| End bp | 1250606 |
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| Gene Length | 1218 bp |
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| Protein Length | 405 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 643539536 |
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| Product | type II secretion system protein |
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| Protein accession | YP_002435452 |
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| Protein GI | 218886131 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1459] Type II secretory pathway, component PulF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 68 |
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| Fosmid unclonability p-value | 0.142759 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCACCT ACGTCTACAC CGCGCTGAAC GAACACGGCG TGAACATGCA AGGCACCATC
GACGCCGAAT CTCCGGACAC GGCCCGTGCC CTGCTGCTGT CGCGCGGCTA TGTGCCCATG
AAGGTCAAGA CACAAGGGGC CAGCTTCGAT TTCGGCGCGC TGGGCGACAT CCTGAACCCG
GTGAAGCCCA AGGAACTCAT CCTGTTCACC AAGCAGTTCC GCACCCTGTT CCAGGCGGGC
ATACCCATCA CCCAGTTGTT GCAGGTGTTG CAGAACCAGA CAGAGAGCAA GAGGCTGAAG
CAGATTGCGG CAGATATGGC CCAATCCATC GTGGGCGGCA GTACGCTGTA CGACGCCTTT
CGGGCGCACC CCCGCGTGTT CAGCGAGTTA TACTGCTCCA TGATGCGCGC CGGGGAGGCC
AGCGGCGCGC TGGGCGACGT GATGGAACGC CTTGTGTACC TGCTGGAGCA CGAGCACAAG
ATACGTTCCG ACATCAAGTC CGCCATGCGC TACCCGAAGA TGGTCGTCAG CGCGCTGCTG
GCGGCATTCT TCATACTACT GAACGTTGTC ATTCCCAAAT TCGTCGTCAT CTTCGCGCGG
GCCAAAATCG AACTCCCCTG GCCCACCCAG GTAGCCATGG GCATGCACTA CATCATGACC
ACATACTGGC CCATTGTCCT AGGACTGCTG GTGGCTGCCA TCGCGGGCTA CAAGTGGTGG
GTGCGCACCC CGGCAGGCAA ATACTGGCGC GACTACACCC TGCTGCACGT GCCCATCATC
GGCCCAGTAT TGCAAAAATC CGTCATGGCA CGCTTCGCCT CCATCTTCTC CATCTTGCAG
TCCAGCGGGG TGACCGTGCT GGATGCGTTA GACGTGCTGA CCAACACCAT CGGCAATGCG
GCCATTGCCA GTGAATTTCG CAAGATACAG GACAAGTTGC GCGAAGGAAG GGGTATTGCG
GACCCGTTGA AGTCCGCAAA ATTCTTCACC CCGCTGGTCA TCAACATGGT GGCCATTGGC
GAGGAGTCGG GCAGCCTTGA TTCCATGCTC AATGATGTCG CCCGCCATTA CGACGAGGAA
GTGGAATACG CCGTGGCGGG CATGTCCGAG GCCATCGGGC CGGTGCTTAT CATCGCTCTG
GCGGCGGTGG TGGGTTTTTT CGCCTTGGCT ATCTTCATGC CCATGTGGGA TCTGACCAAG
GTTGCTCGCA AAATGTAG
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| Protein sequence | MPTYVYTALN EHGVNMQGTI DAESPDTARA LLLSRGYVPM KVKTQGASFD FGALGDILNP
VKPKELILFT KQFRTLFQAG IPITQLLQVL QNQTESKRLK QIAADMAQSI VGGSTLYDAF
RAHPRVFSEL YCSMMRAGEA SGALGDVMER LVYLLEHEHK IRSDIKSAMR YPKMVVSALL
AAFFILLNVV IPKFVVIFAR AKIELPWPTQ VAMGMHYIMT TYWPIVLGLL VAAIAGYKWW
VRTPAGKYWR DYTLLHVPII GPVLQKSVMA RFASIFSILQ SSGVTVLDAL DVLTNTIGNA
AIASEFRKIQ DKLREGRGIA DPLKSAKFFT PLVINMVAIG EESGSLDSML NDVARHYDEE
VEYAVAGMSE AIGPVLIIAL AAVVGFFALA IFMPMWDLTK VARKM
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