| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DvMF_0861 |
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| Symbol | |
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| ID | 7172750 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011769 |
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| Strand | + |
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| Start bp | 1037292 |
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| End bp | 1038083 |
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| Gene Length | 792 bp |
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| Protein Length | 263 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 643539362 |
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| Product | polar amino acid ABC transporter, inner membrane subunit |
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| Protein accession | YP_002435285 |
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| Protein GI | 218885964 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 78 |
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| Fosmid unclonability p-value | 0.820023 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCAACG AACCCCAGAA CGTCCGCATC GTCATCACCG ACGGCGCGAT CATACCGGAC
CCGAAGGAAC GGCGGATCAT AACCGCATGG TCCATCTCCT TCGTGGGCGC GCTGGCCGCG
CTCGTCTACC TGTGCGCGAG CAGGCCCGAA CCTTACTGGC GGTTGCTGCA ATTCCTGCCC
GACGGCATTG CCGTCACCTT CAAGGTGACC GTGCTGTCCA TCCTGTGCTC CATCCCAATC
GGGCTCATCA CCGGGCTTGG CCGCCTGTCG CGCAACCGGC TGATCAACCT GGTGGCCTCC
ACCTACGTGG AAGTGGTGCG GGGCATTCCC CTGCTGGTGC AGCTTTTCTA CATCTACTAC
GCCCTTGGCC GGTTCCTGAA GGTGCCGGAC CTGCTGGCCG CCATCATCGC CCTAAGCGTG
TGCTACGGCG CCTACATGGG CGAGGTGTTC CGCGCGGGCA TCGACTCCAT CTCCAAGGGC
CAGACCGAAG CCGCCCGCTC GCTGGGCTTC AACCGGGCGG AGACCATGTT CATGGTCATC
CTGCCGCAGG CGTGGCGCAC CATCCTGCCG CCGGTGGGCA ACGAATTCAT CGCCATGCTG
AAGGACACCT CGCTGGTGTC CATCATCGCC GTGGCCGACA TCCTGCGTCG CGGGCGCGAA
TTCGCCTCGG AGAGCTTCCT GTACTTCGAG ACGTACACCA TGGTCGCCCT CATCTACCTG
TTGATCACGC TGTTCCTGTC CAAGGGCGTC AGCATCATGG AATCGAGGTT GAACTACTAT
GACCGCCGAT AG
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| Protein sequence | MTNEPQNVRI VITDGAIIPD PKERRIITAW SISFVGALAA LVYLCASRPE PYWRLLQFLP
DGIAVTFKVT VLSILCSIPI GLITGLGRLS RNRLINLVAS TYVEVVRGIP LLVQLFYIYY
ALGRFLKVPD LLAAIIALSV CYGAYMGEVF RAGIDSISKG QTEAARSLGF NRAETMFMVI
LPQAWRTILP PVGNEFIAML KDTSLVSIIA VADILRRGRE FASESFLYFE TYTMVALIYL
LITLFLSKGV SIMESRLNYY DRR
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