Gene DvMF_0627 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvMF_0627 
Symbol 
ID7172514 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris str. 'Miyazaki F' 
KingdomBacteria 
Replicon accessionNC_011769 
Strand- 
Start bp748941 
End bp749627 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content67% 
IMG OID643539127 
ProductSel1 domain protein repeat-containing protein 
Protein accessionYP_002435052 
Protein GI218885731 
COG category[R] General function prediction only 
COG ID[COG0790] FOG: TPR repeat, SEL1 subfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones68 
Fosmid unclonability p-value0.0876811 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGAGG CGGGCGACGC AAGCGCCCAG TTCAATCTTG GCATGCTGTA CTACGAAGGC 
AACGGCGTGG CGCAGGACTT CGGCAAGGCC GCCCAGTGGC TGGGCCGCGC CGCCAAGGCG 
GAGCATCACG AGGCCCTCAA CTTCTACGGC GTGCTGCACG CCACCGGCAA GGGTGTGGCG 
CAGGACTTCG GCAAGGCGCT GGAACTGTTC CGCAAGGCCG ACAAGTGCGG CTACAATTGC 
GAACCTGTTT ACGACGATCT GCCCACCGAC TTCCGCGACA AGCAATTCGG CATGGAACTG 
GTGGCCGCCA AGCGCGACTT TGTCCGCAAG GCGCGCCTGC TGGCCGCCGA GGCTCGCTGC 
AACGTGGGGC TTGCCTACCA CGGCGAGGCC ACCGACGCCA CCTCGCGCAA GGTCGCGCGC 
GAACTGTTCC TGAGCGCGGC CACCCTGGGC AACGGCAAGG CCATGCACTT GCTCGGCACC 
ATGTGTCGTG ACGGTGCGGG CGTGCCCGCC AGCGAGGTGC GCGCGTACAT GTGGTTCGAC 
CTGGCCGTGA CGGCGGGCTT TGCCAAGGCC GGAGACGCCC GGCGCGAACT GATCGACAGG 
ATGAAGGACA AGGACGTGGC GCGGGCCGAA AAGCTTGCGG CGCGCTGGCT GCGGTGTTTC 
CCGCTGCCGG AGGGTGCGGC CCAGTAA
 
Protein sequence
MAEAGDASAQ FNLGMLYYEG NGVAQDFGKA AQWLGRAAKA EHHEALNFYG VLHATGKGVA 
QDFGKALELF RKADKCGYNC EPVYDDLPTD FRDKQFGMEL VAAKRDFVRK ARLLAAEARC 
NVGLAYHGEA TDATSRKVAR ELFLSAATLG NGKAMHLLGT MCRDGAGVPA SEVRAYMWFD 
LAVTAGFAKA GDARRELIDR MKDKDVARAE KLAARWLRCF PLPEGAAQ