Gene DvMF_0622 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvMF_0622 
Symbol 
ID7172509 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris str. 'Miyazaki F' 
KingdomBacteria 
Replicon accessionNC_011769 
Strand
Start bp744174 
End bp744716 
Gene Length543 bp 
Protein Length180 aa 
Translation table11 
GC content66% 
IMG OID643539122 
Producttranscriptional regulator, BadM/Rrf2 family 
Protein accessionYP_002435047 
Protein GI218885726 
COG category[K] Transcription 
COG ID[COG1959] Predicted transcriptional regulator 
TIGRFAM ID[TIGR00738] rrf2 family protein (putative transcriptional regulator) 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones63 
Fosmid unclonability p-value0.0242218 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCTTG CAGCAAAGAC ACGATACGCG GCGCGCATCC TTCTTGCTTT GGCCATGCAC 
GGCGAAGAGT CTCCCATGAC CACCACGGCG CTGTCCCAGC ACACCGGCGT GACGGTCCAG
TTCATCGAAC AGATTCTCAA GACGCTGAAG CGTGGCGGGT TGACGCGCAG TTCTCGCGGG
GCCTCCGGCG GCCACATGCT GGCCCGTACC CCCGAAGAGA TCACCCTGAG CGAGATCGTG
CGCCTGATGG AAGGGGGCAT CCAGCTTACC GTCTGCTGCT CCGGCGATGC CAATGCATGC
GCCCGCCGGG CCTCGTGCCT GACCAGGTCG GCCTGGGTGC GAGCATCGCA GGCGTTGGAG
CATTCGCTGG AGGAGACCAC CCTGGCTACC CTCATGGAAG GTGATCAGCC GCTCTCTCCC
CACGACGAGG CGGCCTGTCG CGCGGCGGAC GACGATGCTT CCACCGAGAG GCGTTCAGCT
GCCCGCCGCC CGGCCCGTCC GAGCCGTGCG CCCCGCTCGG TAAGCCCCGC CGAACTGTAC
TGA
 
Protein sequence
MKLAAKTRYA ARILLALAMH GEESPMTTTA LSQHTGVTVQ FIEQILKTLK RGGLTRSSRG 
ASGGHMLART PEEITLSEIV RLMEGGIQLT VCCSGDANAC ARRASCLTRS AWVRASQALE
HSLEETTLAT LMEGDQPLSP HDEAACRAAD DDASTERRSA ARRPARPSRA PRSVSPAELY