Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DvMF_0622 |
Symbol | |
ID | 7172509 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
Kingdom | Bacteria |
Replicon accession | NC_011769 |
Strand | - |
Start bp | 744174 |
End bp | 744716 |
Gene Length | 543 bp |
Protein Length | 180 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 643539122 |
Product | transcriptional regulator, BadM/Rrf2 family |
Protein accession | YP_002435047 |
Protein GI | 218885726 |
COG category | [K] Transcription |
COG ID | [COG1959] Predicted transcriptional regulator |
TIGRFAM ID | [TIGR00738] rrf2 family protein (putative transcriptional regulator) |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 63 |
Fosmid unclonability p-value | 0.0242218 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGCTTG CAGCAAAGAC ACGATACGCG GCGCGCATCC TTCTTGCTTT GGCCATGCAC GGCGAAGAGT CTCCCATGAC CACCACGGCG CTGTCCCAGC ACACCGGCGT GACGGTCCAG TTCATCGAAC AGATTCTCAA GACGCTGAAG CGTGGCGGGT TGACGCGCAG TTCTCGCGGG GCCTCCGGCG GCCACATGCT GGCCCGTACC CCCGAAGAGA TCACCCTGAG CGAGATCGTG CGCCTGATGG AAGGGGGCAT CCAGCTTACC GTCTGCTGCT CCGGCGATGC CAATGCATGC GCCCGCCGGG CCTCGTGCCT GACCAGGTCG GCCTGGGTGC GAGCATCGCA GGCGTTGGAG CATTCGCTGG AGGAGACCAC CCTGGCTACC CTCATGGAAG GTGATCAGCC GCTCTCTCCC CACGACGAGG CGGCCTGTCG CGCGGCGGAC GACGATGCTT CCACCGAGAG GCGTTCAGCT GCCCGCCGCC CGGCCCGTCC GAGCCGTGCG CCCCGCTCGG TAAGCCCCGC CGAACTGTAC TGA
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Protein sequence | MKLAAKTRYA ARILLALAMH GEESPMTTTA LSQHTGVTVQ FIEQILKTLK RGGLTRSSRG ASGGHMLART PEEITLSEIV RLMEGGIQLT VCCSGDANAC ARRASCLTRS AWVRASQALE HSLEETTLAT LMEGDQPLSP HDEAACRAAD DDASTERRSA ARRPARPSRA PRSVSPAELY
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