| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DvMF_0616 |
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| Symbol | |
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| ID | 7172503 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011769 |
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| Strand | + |
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| Start bp | 730088 |
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| End bp | 732814 |
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| Gene Length | 2727 bp |
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| Protein Length | 908 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 643539116 |
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| Product | signal transduction histidine kinase, nitrogen specific, NtrB |
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| Protein accession | YP_002435041 |
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| Protein GI | 218885720 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3852] Signal transduction histidine kinase, nitrogen specific
[COG4564] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 56 |
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| Fosmid unclonability p-value | 0.0119428 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGCCA TTCCCCCCCG CACCCTTGCC TCGCTTCTGC GCAGCCCGCC CGTGCGGCGG
CTGTGGCTGC TGCTGGTACT GGCGTGCGCG GTGTTCACCC TGTTCCTGCT GCACGCGGTG
CACACCTTCT GGGAAACGGC GGAAACATAC CGCCGCAGCC ACCTGCGCGA AATGGTGCTG
CTGGCCCGCA ACCAGGTGCA ACCCGTGCTG GATGAACTGG CCGCAGGCGC CTATGGCCGC
GACCACGCCC TGGTGCTGGT GCGCGAGCGG GTGCGCACCA TGATCTTCAA CGATACCCAC
GGCCCCAACT ACATCTTCAT GAGCGGCTAC GACGGCACCG TGCTGGTCCA GCCCTACAAC
CGGCTGATGG AAGGCCGCAG CGGCCTTGAC CTGCGCGATG CCAACGGGGT GGCCATCATC
GTGGAACTCA TCAGGACCGC GCAGGCGAAC CCCGACGGCG GCTATTTCTC GTACCTCTAC
ACGCCGCCCG ACAGCAGCGA ACCGGAAGAA AAGCTGTCGT TCGTGCTGCC CATCCCCGAA
CTGGCCTGCT ACATCGGCAC CGGATCGTAC CTTGGCGACG TGCACGCCGG AGAACGCCGA
TACATCCTGG CCACGGCGGC CCTGGCCGTG ACCGTGTTCG TGCTGCTGGG GCTTACCTTC
GTCACCGCGC TGGGCGCCCT TGCCCGGCGC GGCGCGGAAC TGGAACGCGA GGTGGAGGAA
CGCAAGGCCA CCGAACAGCG TCTGGCCGCG GCGGAACTGA AATACCGCTC CATCTTCCAG
AACGCGCAGG AAGGCATAGC CGTCATCCAG GACGGGCTGC TGCGCTTCGT CAACCCGCGC
ATCGGCGAGA TACTGCGCCG CCCCGCAGAA GAACTGGTGG GCACTCCGTT CACCGACCAC
CTGCACCCCG CCGACCGGCC CGTGGCCAGG GACAGGTACA TACGCCGCCT GAACGGCGCA
CCGCTGGGCA CCTACCCACC GGTGCGCATC TGCGCACCCG ATGGCGAACG CTGGGTGTTC
GGCACCGGGG TGCTGCTGGA GTGGGATGGC CGCCCGGCGG TGCTGGTGAT GCTGACCGAC
ATCACAGACC TGAAGAAGGC CGAACAGGCC CTGCACGCGC GCGAGCAGCA GTTCCGCGCC
GTGCTCACCC AGGCCCCATT CGCCATGGCC CTGCTGCACC CGGACGGCAC CCTGCGCGAG
GCCAATGCCG AATGGCTGGC CCTGCACGGC CTTGCCGAAG CCACAGGCAA CCCCGCCGTG
TACACCCTGG GCCAGGACCG CTACGTGCTG CACGCCGGGC TGCACGGGCT GGCCCAAGCC
GCCCTTGCGG GCGAGGCCAT CGCCACCGAG CCGCTGGAAT TTCCGCCCGA CGCCACGCCC
GACGGCCAGA CCCGCTGGAT GGCCCTGCGC CTGTATCCCG TGGGCGGCGC ACCGGGCAAG
CCCGACGCCG TGGCCTTCAA CCTGAACGAC CTGACGGTGC TCATGGAGTC GGAACGTGAG
CGCCAGGCCC TGCTGGCCGA CCTTTCGCGC GCCAACCGCG CCCTGTCCCG CGCCCAGCGC
CACCTGAAGG GCGTGCTGGA TGCCATGCCC TCGGCCATCG TGGTGGCCGA CGCCGCCGAC
AGGGTGGTGC TATGGAACCC CGCTGCGGAA AGGCGCTTCG GCGTTGCGGC CCCGTCCGCC
CATGGCCGCC CGCTGGTGGA AGTCGCCCCG GAACTGGCCC GCCACCTGCC CCGGCTGCAC
GCGGCCCGGC GCGGGGGCGC GGCCGTGCCG CCCGAACGGG TGGTCACGCC CGTTGAGCTT
CCGGCGGGTT CTCAGCCGGG AACCCTGTCC CGCGAATCCC GCCGGGTGGA GGACGTCACC
GCCATTCCGC TGGAAACCGG CGAGGAAATG TGGGGCATCC TGCGCCTGGA CGACGTGAGC
GAACGCGCGG CCATGGAAGA CCTGATGGTG CAGGCCGAAA AGATGGCCTC GGTGGGGGGG
CTTGCGGCAG GCATGGCCCA CGAGATCAAC AACCCGCTGG GAGGCATCCT GCAAGGGGTG
CAGAACCTGC GCCGCCGCCT GCTGGACGAC CTGCCCGCCA ACCGCGCGGC GGCGGAACGG
CAGGGCATGG ATTTCGACCG CATTGCCGCC TACGCGGAAG AACGCCGCAT CGGCGGGCTG
CTGGACGGCA TCCGTGAATC GGGCGAACGC GCCACGCGCA TCGTGGCCAA CATGCTCACC
TTCAGCCGCC GCAGCGACCC TTCGCGCGTG CCGGTGCAGA TCAACGACCT GCTGGAGCGC
ACGCTGGAAC TGGCGGTTAC CGATTACAGC CTGGCCCGCA ACTACGACTT CAAGCGCATT
ACCGTGGTAC GCCGCTACGA CCCGCAGTTG CCGCCGGTTC GCTGTTCCGC CAGCGAAATG
GAACAGGTAT TCCTGAACCT GTTCAAGAAC GCGGCGCAGG CACTGGCGCT GCGCGACGAC
GGGCCGCCGC CGGTGCTCAC CCTGACCACC GCCGTGGAGG TGGCGCACCT GCGCATAGAG
GTGGCCGACA ACGGCCCCGG CATGTCGCCT GAACTGCGCC GCCGGGCCTT CGAGCCGTTC
TTCACCACGC GCGAGGCAGG CGCGGGCACG GGACTTGGCC TTTCGGTGGC CTACTTCATC
GTGGTCACCA ACCACAAGGG CACCATCACC ATCGAGGAAG CGCCGGAAGG CGGCGCGGTG
GTCGTGGTGC GCCTGCCCCT GGCCTGA
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| Protein sequence | MNAIPPRTLA SLLRSPPVRR LWLLLVLACA VFTLFLLHAV HTFWETAETY RRSHLREMVL
LARNQVQPVL DELAAGAYGR DHALVLVRER VRTMIFNDTH GPNYIFMSGY DGTVLVQPYN
RLMEGRSGLD LRDANGVAII VELIRTAQAN PDGGYFSYLY TPPDSSEPEE KLSFVLPIPE
LACYIGTGSY LGDVHAGERR YILATAALAV TVFVLLGLTF VTALGALARR GAELEREVEE
RKATEQRLAA AELKYRSIFQ NAQEGIAVIQ DGLLRFVNPR IGEILRRPAE ELVGTPFTDH
LHPADRPVAR DRYIRRLNGA PLGTYPPVRI CAPDGERWVF GTGVLLEWDG RPAVLVMLTD
ITDLKKAEQA LHAREQQFRA VLTQAPFAMA LLHPDGTLRE ANAEWLALHG LAEATGNPAV
YTLGQDRYVL HAGLHGLAQA ALAGEAIATE PLEFPPDATP DGQTRWMALR LYPVGGAPGK
PDAVAFNLND LTVLMESERE RQALLADLSR ANRALSRAQR HLKGVLDAMP SAIVVADAAD
RVVLWNPAAE RRFGVAAPSA HGRPLVEVAP ELARHLPRLH AARRGGAAVP PERVVTPVEL
PAGSQPGTLS RESRRVEDVT AIPLETGEEM WGILRLDDVS ERAAMEDLMV QAEKMASVGG
LAAGMAHEIN NPLGGILQGV QNLRRRLLDD LPANRAAAER QGMDFDRIAA YAEERRIGGL
LDGIRESGER ATRIVANMLT FSRRSDPSRV PVQINDLLER TLELAVTDYS LARNYDFKRI
TVVRRYDPQL PPVRCSASEM EQVFLNLFKN AAQALALRDD GPPPVLTLTT AVEVAHLRIE
VADNGPGMSP ELRRRAFEPF FTTREAGAGT GLGLSVAYFI VVTNHKGTIT IEEAPEGGAV
VVVRLPLA
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