Gene DvMF_0605 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvMF_0605 
Symbol 
ID7172492 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris str. 'Miyazaki F' 
KingdomBacteria 
Replicon accessionNC_011769 
Strand
Start bp717543 
End bp718166 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content66% 
IMG OID643539105 
Productpyruvate ferredoxin/flavodoxin oxidoreductase 
Protein accessionYP_002435030 
Protein GI218885709 
COG category[C] Energy production and conversion 
COG ID[COG1014] Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, gamma subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones49 
Fosmid unclonability p-value0.00011179 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAGGCGC CGCAACCCAT AGACCGTTTC GAAATCCGCC TTTCGGGCCT GGGCGGGCAG 
GGGCTGATCA CCCTGGGCCG CCTGCTGGGT TCGGCGCTGG CGCTGGGCCA CGGCTATTAC
GTCACCCAGA CCCAGAGCTA CGGCCCCGAA GCGCGCGGCG GCTCCAGCCG CGCCGACGTG
GTTGTCAGCT CGCGCCCCAT CAGCTACCCC AAGACCGAAA ACCTGGACCT GCTGGTGGCC
CTGAGCCCCG AGGCGTGCAA CAGCTACTAC CGGCTGCTGA AGAAGACCGG CATCCTGCTG
GTGGACACCA CCCTGGTCAA GCACGCGCCC ACCAACGTGT ACCTGGGGCT GCCGTTCACC
CAGATGGCCA AGGAGCAGAT CGGCAACCCC ATGACCATCA ACACCATGGT CATGGGCGCG
GTGACGCACC TTCTGCCCTT TGCCGACCCC AAGGTGATGC GCAAGAGCCT GGAGGCCAAC
CTGCCCGCCA AGATCCGCGA GGTGAACGCC AAGGCCTTTG CCCTGGGGCT GAAGCAGGCC
CAGCGCAACT TCGGCGATGC GGGCGGCATC TGGGCGGCGG CGGAGGAGAA TGGGGCGCAT
TCTGAAGACG ACATCATAGT GTAG
 
Protein sequence
MKAPQPIDRF EIRLSGLGGQ GLITLGRLLG SALALGHGYY VTQTQSYGPE ARGGSSRADV 
VVSSRPISYP KTENLDLLVA LSPEACNSYY RLLKKTGILL VDTTLVKHAP TNVYLGLPFT
QMAKEQIGNP MTINTMVMGA VTHLLPFADP KVMRKSLEAN LPAKIREVNA KAFALGLKQA
QRNFGDAGGI WAAAEENGAH SEDDIIV