Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DvMF_0536 |
Symbol | |
ID | 7172423 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
Kingdom | Bacteria |
Replicon accession | NC_011769 |
Strand | - |
Start bp | 631256 |
End bp | 632881 |
Gene Length | 1626 bp |
Protein Length | 541 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 643539036 |
Product | cytochrome c oxidase, subunit I |
Protein accession | YP_002434961 |
Protein GI | 218885640 |
COG category | [C] Energy production and conversion |
COG ID | [COG0843] Heme/copper-type cytochrome/quinol oxidases, subunit 1 |
TIGRFAM ID | [TIGR02891] cytochrome c oxidase, subunit I |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
| |
Fosmid Coverage information |
Num covering fosmid clones | 64 |
Fosmid unclonability p-value | 0.091525 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGCGCAG ACGCGCACGA CCACCCGAAC TTCTTCCAGC CGTTGCCCGG CACGAAGGGC GGGATTGCCT CGTGGATTTT CAGCACCGAC CACAAGCGCA TCGGCATGCT GTACCTGTAC TGCATCGTCG CCATGTTCCT GGTGGGGCTG ACACTCGGCT TCCTGATCCG GCTGGAACTC ATCGCGCCGG GCCGCACCAT CATGGGGCAG CAGACCTACA ACGCGCTGTT CACCCTGCAC GGGGTGGTGA TGATCTTCCT GGTGGTCATC CCCAGCATTC CCGCCGCGTT CGGCAACATC TTCCTGCCCA TCCAGATCGG GGCGGAGGAC GTGTCCTTTC CCCGGCTGAA CATCTTTTCG TGGTGGCTGT ACGTCACCGG CGCGGTGCTG GCCGTGGTCT CGCTGGTCAC CGGCAAGGGC GCGCCCGACA CCGGCTGGAC CTTCTACGTG CCCTTCAGCG CGGTGACCAC CACCAACGTG GACGTGGCCG TCGTTGCCGT GTTCATCCTG GGCTTTTCGT CCATTCTCAC CGGGCTGAAC TTCATCACCA CCCTGCACCG GCTGCGCGCC CCCGGCATGA CCTGGACGCG CCTGCCGCTG TTCTGCTGGT CGCTGTACGC CACCGGATGG ATTCAGGTGC TGGCCACGCC GGTGCTGGGC ATCACCGTGC TGCTCATCTT CGTCGAGCGC GTGCTGGGCG TGGGCCTGTT CGATCCCTCG CGCGGGGGCG ACCCCATCCT GTACCAGCAC CTGTTCTGGA TCTATTCGCA CCCGGCGGTG TACATCATGA TCCTGCCCGC CATGGGCGTT ATCTCCGAGA TTCTGCCGGT GTTCGCGCGC AAGCCCATCT TCGGCTACAA GATGATCGCC TTCTCCAGCC TTGCCATCGC CTTCGCCGGG TCGCTGGTGT GGGCGCACCA CATGTTCGTC AGCGGCATGA GCGACACGGC GGTGATGGTC TTTTCGTTCC TGACCTTCGT GGTTGCCATT CCGTCGGCCA TCAAGGTCTT CAACTGGGTG TCCACGCTGT ACAAGGGGTC CATCCGGGTG GAACCGCCCC TGTGGTACGC GCTGGCGTTC ATCTTCCTGT TCTCCATCGG CGGGCTGACG GGCCTTGTGC TGGGCGCGGC GGGCACCGAC GTGCACGTGC ACGACACCTA CTTCGTGGTG GCGCATTTCC ACTACGTGAT CTTCGGCGGG CTGGGCTTCG GGCTGTTCGG GGCCATGCAC TACTGGTTCC CCAAGGTCTA CGGGCGCATG TACGACAAGC GCATCGCCAA CTGGTCGTGC CTGGTCGCCT TCGTGGGCTT CAACATCCTG TACTTTCCCA TGTTCATTCT GGGGCTGCAG GGCATGCCGC GCCGCTACTA CGACTACCTG CCCAAGTATG CCGAGGGGCA CTTCATCTCC ACCATGGGCT CGTGGGTGCT GGCGACGGGG CTACTGCTGA TGTTCTGGAA TCTCTGGCGG GGCATCCGCC ACGGCAAGCC CGTGGGCCGC AACCCGTGGG GCGCGGCCAC CCTGGAGTGG ACGGTGCCTT CGCCGCCCCC GCACCACAAC TTCGAGGCCG AGCCCGTGGT CACCCATGGT CCCTACGACT ACACGGGGGT GAAGCCCGAT GCATGA
|
Protein sequence | MSADAHDHPN FFQPLPGTKG GIASWIFSTD HKRIGMLYLY CIVAMFLVGL TLGFLIRLEL IAPGRTIMGQ QTYNALFTLH GVVMIFLVVI PSIPAAFGNI FLPIQIGAED VSFPRLNIFS WWLYVTGAVL AVVSLVTGKG APDTGWTFYV PFSAVTTTNV DVAVVAVFIL GFSSILTGLN FITTLHRLRA PGMTWTRLPL FCWSLYATGW IQVLATPVLG ITVLLIFVER VLGVGLFDPS RGGDPILYQH LFWIYSHPAV YIMILPAMGV ISEILPVFAR KPIFGYKMIA FSSLAIAFAG SLVWAHHMFV SGMSDTAVMV FSFLTFVVAI PSAIKVFNWV STLYKGSIRV EPPLWYALAF IFLFSIGGLT GLVLGAAGTD VHVHDTYFVV AHFHYVIFGG LGFGLFGAMH YWFPKVYGRM YDKRIANWSC LVAFVGFNIL YFPMFILGLQ GMPRRYYDYL PKYAEGHFIS TMGSWVLATG LLLMFWNLWR GIRHGKPVGR NPWGAATLEW TVPSPPPHHN FEAEPVVTHG PYDYTGVKPD A
|
| |