| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DvMF_0526 |
|---|
| Symbol | |
|---|
| ID | 7172413 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011769 |
|---|
| Strand | + |
|---|
| Start bp | 620601 |
|---|
| End bp | 622193 |
|---|
| Gene Length | 1593 bp |
|---|
| Protein Length | 530 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 643539026 |
|---|
| Product | L-aspartate oxidase |
|---|
| Protein accession | YP_002434951 |
|---|
| Protein GI | 218885630 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0029] Aspartate oxidase |
|---|
| TIGRFAM ID | [TIGR00551] L-aspartate oxidase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 73 |
|---|
| Fosmid unclonability p-value | 0.761934 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACAATT CCACCTACCG CCTGCATACT CCTGTTCTGG TCATCGGCTC GGGCATCGCC
GGGTGCACCG CCGCGCTCAC CCTGGCCGAC CAGGGCATGG AAGTGACGCT CATCAACAGC
GGCCAGCAAC TGGACAGCGG CAATTCCGCC CTGGCCCAGG GCGGCATCGT GTTCCGCGCG
GGCGACGGCG ACCCCCGCCA ACTGGAAAGC GACATCCTCA TCGCCGGACA CCGCCACAAC
CACCTGCGCG CGGTGCGCCA CATTGCCCGC AACGGCCCCA AGGCCGTGCA GGACATCCTT
GTGGACCGGC TGCACATTCC CTTCGCCAAA GGGCGCACCC CCGAATGCGA ATGGGACCTG
ACCATGGAAG GCGGCCACGG GGCGCACCGC ATCCTGCACT GCGCCGACTA CACCGGGCGG
GCCATCATGG ACGGGCTGAT GGCGGCGGTG AACGACGCCC CCAACATCCG CGTGCTGTCG
GAACGCACCG CCGTCGACCT GCTGACCAGC CATCACCATG CCCGCAACAA CGAATTCCGC
TACCAGCTCA ACAACCAGTG CGTTGGTGCC TACGTCTTCA ACGAACAGCT GCGCCGGGTG
GAAACCATCC TTGCGGACAT CACCGTGCTG GCCACCGGCG GCATCGGGCA GGTGTACCTG
CACACCACCA ACAGCCCGGC CTGCATCGGA TCCGGCATCG CCATGGCCAG CCGCGCCTTC
GTACGCACGG AAAACCTGGA GTACGTGCAG TTCCACCCCA CCGCCCTGCT GCACCGCAGT
TCGCGCCGGT TCCTGGTCAC CGAGGCCATG CGCGGCGAAG GCGGGCGGCT GGTGAACGGC
AGCGGCGAGC ATTTCATGGA ACGCTACGAC CCCCGCGCCG ACCTTGCCCC GCGTGACATC
GTGGCCCGGT CCATCGTGGA GGAAATGCTG CGCAACGGCG AGGAATGCGT GTACCTGGAC
GCCCGCCACA TGGAGCAGGA CCCTTCGGAG CGCTTCCCCA CCATCTTCGC CCGGTGCATG
GAACTGGGCA TCGACATCCG GCGCGACCTG ATCCCCGTGG TGCCCGCCGC GCACTACTTC
TGCGGCGGCA TCCTTACCGA CCTGACGGGC CGCACCACCC TGGAACGACT GTACAGCGTG
GGCGAATGCA GCTGCACCGG CGTGCACGGC GCCAACCGCC TGGCGTCCAC CTCGCTGCTC
GAAGCGCTGC TGTGGGGCCG CGCCGCCGCA GAGGACATCG CCAAACGCTC CGGCGCCCAG
CGCGGCCTTG GCAAGCGCCT GCGCGACTCC ATCCCCGACT GGCAGTCCTC CGGCGACGAA
CGCAACGACG ACCCGGCCCT CATCGCGCAG GACTGGGCCA CCATCCGCCA CACCATGTGG
AACTACGTTG GCATCACCCG CACCCGCAGC CGCCTGCAAC GCGCCTTCGA AGACCTGCGC
GACCTGTCGC GGCATCTGCA CGACTTCTAC AAGCGCACCC CGCTCTCCAA GCCCCTCGTG
GACCTGTTCC ACGGCTGCCA GACCGCGTAC ATGGTGACCA TGGCCGCGCT GCGGAACAAG
CAGAGCCTGG GGTGTCATTA CCGGGTGGAT TAG
|
|---|
| Protein sequence | MNNSTYRLHT PVLVIGSGIA GCTAALTLAD QGMEVTLINS GQQLDSGNSA LAQGGIVFRA
GDGDPRQLES DILIAGHRHN HLRAVRHIAR NGPKAVQDIL VDRLHIPFAK GRTPECEWDL
TMEGGHGAHR ILHCADYTGR AIMDGLMAAV NDAPNIRVLS ERTAVDLLTS HHHARNNEFR
YQLNNQCVGA YVFNEQLRRV ETILADITVL ATGGIGQVYL HTTNSPACIG SGIAMASRAF
VRTENLEYVQ FHPTALLHRS SRRFLVTEAM RGEGGRLVNG SGEHFMERYD PRADLAPRDI
VARSIVEEML RNGEECVYLD ARHMEQDPSE RFPTIFARCM ELGIDIRRDL IPVVPAAHYF
CGGILTDLTG RTTLERLYSV GECSCTGVHG ANRLASTSLL EALLWGRAAA EDIAKRSGAQ
RGLGKRLRDS IPDWQSSGDE RNDDPALIAQ DWATIRHTMW NYVGITRTRS RLQRAFEDLR
DLSRHLHDFY KRTPLSKPLV DLFHGCQTAY MVTMAALRNK QSLGCHYRVD
|
|---|
| |