| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DvMF_0458 |
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| Symbol | |
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| ID | 7172344 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011769 |
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| Strand | - |
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| Start bp | 536831 |
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| End bp | 539281 |
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| Gene Length | 2451 bp |
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| Protein Length | 816 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 643538957 |
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| Product | ATP-dependent Clp protease, ATP-binding subunit clpA |
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| Protein accession | YP_002434883 |
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| Protein GI | 218885562 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0542] ATPases with chaperone activity, ATP-binding subunit |
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| TIGRFAM ID | [TIGR02639] ATP-dependent Clp protease ATP-binding subunit clpA |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 71 |
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| Fosmid unclonability p-value | 0.605074 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCGGAA GACGCCTTGA AGCAGCGCTT ACCGCCGCCG TCAACGACGT GCGGACGCGC
AATCACGAGT TCCTGACGCT GGAGCATCTG CTCTACGCCA TCACCGGCGA GGATGCGGGC
AAGCACATCC TGGAGGCCGT GGGGGTGGAC GTGAAGTCCC TGCGCCTGCG TTTGGAAACC
TTTTTCGCCA CCCATCTGGA GCCGCTGCCC GCCGATACCC CCACCGAGGT GGTGCAGACC
CTGGGCGTGC AGCGCGTGTT GCAGCGGGCC ATCCGCCACA TGCAGTCCGC GGGCAAGGGC
GCCGTGGAAA TAGGCGACGT GCTGGCCGCC ATCTTCGAAG AGGACGACGC CTACGCCACC
TACTTCCTGA AGTCGCAGGG GGTGACCCGG CTGGACGTGT TGCAGCACAT CTCGCACGGT
GCGCCGCAGG GTGGCGACGT GGACGGCGGC GACGACGCCG AGGGCGAGGA CGGCGCGCCG
GACACGCCCC GCATCGACGC GCTGGAAAAG TTCACCGTGG ACCTGACCGC CCGCGCCCGC
GATGGCCGCA TCGACCCGCT CATCGGGCGG GTGAAGGAAC TGGAACGGAC CATCCAGGTG
CTGGCCCGGC GGCGCAAGAA CAACCCGCTG TACGTGGGCG ACCCCGGCGT GGGCAAGACC
GCCATCGCCG AAGGGCTGGC CCTGCGCGTG GCGGGCGGCG ACGTGCCCGA GGAATTCCGC
GACGTGCGCA TCTTTGCCCT GGACATGGGC GCGCTGCTGG CCGGCACCAA GTACAGGGGC
GACTTCGAGC AGCGCCTGAA GGGCGTCATC ACCGACCTCG GCAAGGTGCC GGGGGCCATC
CTGTTCATCG ACGAAATCCA CACCATCGTG GGCGCGGGCT CCACCAGCGG CGGCTCCATG
GATGCCTCCA ACATCCTGAA GCCCGTGCTG GCCGACGGCA GCATCCGCTG CATCGGGTCC
ACCACGTACG AGGAATACCG CAACCACTTC GAGAAGGACC GCGCCCTGTC GCGCCGGTTC
CAGAAGATCG ACGTACAGGA GCCTTCGCAG GACGAATGCG TGGACATCCT GAAGGGGTTG
CGCCCCTATT ACGAGGACCA CCACAAGGTG CGTTACACGC TGCCCGCCCT GCGCGCGGCG
GTGGAGCTTT CCGCCAGGTA CATCACCGAG CGGCTGTTGC CGGACAAGGC CATCGACGTG
CTGGACGAGG CGGGTGCGGC GGCCCGGCTG CGGCGTGGTG CCCGCGCGGC GTCGGCATCC
GATGCCGCCA TCGGCGTGAA GGAAGTGGAG AAGGTGGTGG CGCGCATGGC CCAGATACCG
TCGCGCACGG TGTCGTCCAG CGACCGCGAC CGCCTGCGCA CCCTCGATGA AGACCTGCGC
AACGTGGTCT TCGGGCAGGA CGCGGCAGTG GGCATCCTGT CGCGGGCCAT CCTGCGCGCG
CGGGCGGGGC TGGGCCGCGA AGACCGGCCC ACCGGCAGCT TCCTGTTCTA TGGTCCCACG
GGGGTGGGCA AGACCGAACT GGCCCGCCGC CTGGCGGAGG TCATGGGCAT CGGCTTCCTG
CGCTACGACA TGAGCGAGTA CATGGAGAAG CACTCCGTGT CGCGGCTCAT CGGGGCGCCC
CCCGGCTACG TGGGCTTCGA TCAGGGCGGC CTGCTGACCG AGGCCATCCG CAAGCAGCCG
TACACCGTGC TGCTGCTGGA CGAAATCGAA AAGGCCCACC CGGACATCTT CAACATCCTG
CTTCAGGTCA TGGACTACGC CACGCTCACC GACAACACCG GGCGCAAGGC GGACTTCCGC
AACGTGGTGC TGATCATGAC CTCCAACGCG GGCGTGCGCG AAATGAGCGC CCCCGCCATC
GGCTTCGGCG CCACCGCGCA GGAAGACATG GCGGGCAAGG GCCGCAAGGC CGTGGAGAAC
ATGTTCAGCC CGGAATTCCG CAACCGGCTG GACGCCATGA TCCCCTTTGC CGGGCTGACC
ACCCCGGTCA TGGAACGCAT CGTGGACAAG TTCGTGCTGG AACTGGGCTC CGGGCTGAAG
GATCGCCGCG TGCGCCTGGA ACTGACCCCG GCGGCCCGCG CGCGGCTGGC CGAAAAGGGC
TTCGAGCCTG CCTTCGGGGC GCGTCCGCTG CGCCGGGTGA TCCGCACCGC GCTGGAAGAC
GAACTGGCCC GCGAGGTGCT GTTCGGCAAG CTGCGCAAGG GCGGCACCGC CATCGTGGAC
GTGGCCGCGC CCGAGGCTGC GGCAGCGCCC GCAAGGCCCG CCCGCAAGGG GAAGGGCAAG
GCGGCGGCCA GGGATGGTGC GCCGTCAGCC GTGTCCGCCG ACGTGGCCAA GGCCGCGCCG
ACAGTCCCAG CCACGGTCGG GCCGTCCGCC GATCAGCAGG GGATTGCCGG ACTGGGGCTG
GTGTTCCGCT ACGAGCCGCT TGGCGGCGAC GAAGCCGCCA CCGATAAATG A
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| Protein sequence | MIGRRLEAAL TAAVNDVRTR NHEFLTLEHL LYAITGEDAG KHILEAVGVD VKSLRLRLET
FFATHLEPLP ADTPTEVVQT LGVQRVLQRA IRHMQSAGKG AVEIGDVLAA IFEEDDAYAT
YFLKSQGVTR LDVLQHISHG APQGGDVDGG DDAEGEDGAP DTPRIDALEK FTVDLTARAR
DGRIDPLIGR VKELERTIQV LARRRKNNPL YVGDPGVGKT AIAEGLALRV AGGDVPEEFR
DVRIFALDMG ALLAGTKYRG DFEQRLKGVI TDLGKVPGAI LFIDEIHTIV GAGSTSGGSM
DASNILKPVL ADGSIRCIGS TTYEEYRNHF EKDRALSRRF QKIDVQEPSQ DECVDILKGL
RPYYEDHHKV RYTLPALRAA VELSARYITE RLLPDKAIDV LDEAGAAARL RRGARAASAS
DAAIGVKEVE KVVARMAQIP SRTVSSSDRD RLRTLDEDLR NVVFGQDAAV GILSRAILRA
RAGLGREDRP TGSFLFYGPT GVGKTELARR LAEVMGIGFL RYDMSEYMEK HSVSRLIGAP
PGYVGFDQGG LLTEAIRKQP YTVLLLDEIE KAHPDIFNIL LQVMDYATLT DNTGRKADFR
NVVLIMTSNA GVREMSAPAI GFGATAQEDM AGKGRKAVEN MFSPEFRNRL DAMIPFAGLT
TPVMERIVDK FVLELGSGLK DRRVRLELTP AARARLAEKG FEPAFGARPL RRVIRTALED
ELAREVLFGK LRKGGTAIVD VAAPEAAAAP ARPARKGKGK AAARDGAPSA VSADVAKAAP
TVPATVGPSA DQQGIAGLGL VFRYEPLGGD EAATDK
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