| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DvMF_0416 |
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| Symbol | |
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| ID | 7172302 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011769 |
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| Strand | - |
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| Start bp | 485193 |
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| End bp | 488771 |
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| Gene Length | 3579 bp |
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| Protein Length | 1192 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 643538915 |
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| Product | pyruvate phosphate dikinase PEP/pyruvate-binding |
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| Protein accession | YP_002434841 |
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| Protein GI | 218885520 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0574] Phosphoenolpyruvate synthase/pyruvate phosphate dikinase |
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| TIGRFAM ID | [TIGR01418] phosphoenolpyruvate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 53 |
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| Fosmid unclonability p-value | 0.0134571 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGCAAAA CTCCGGTTGA AAAGCCCGCG GCCAAGGCCG CCAAGGCTGG CGCCGAGATT
TCCGAACTTA CCAAGAAGCT GGTGCTGACC GGCGCCGACA TCGTGCGCAT CGGCGACGAT
GCCGAACTGC TGGTCGGCGG CAAGAACTAC AACACCGCCA TCATCAGCCA GGTGGAAGGA
ATCCGCGCAC CCGAGTTCCG CGCCATATCG TCGCAGGCAT TCCACATGCT GCTCGACGAA
ACCAGGGTCA ACGCATCGCT CGTCCGCGCC ACCGTGGACA AGGAATACAA CCGCATCGAC
TGGAACGACC CCGAGATCAA CAAGGATTCG GAGTTCCTGC AGAAGTTCGT TCGCAACCTG
GCCAAGGAAA TCCGCGCCCA GGCTTCGGCC AAGCCCGGTG AAACCCAGAT CAAGCTGCGC
ACCTTCGTCA ACAACGTGGT GGAAGGCTTC GCCACCTCGC CGGAAGGCAT CGACCAGTTG
CGCAAGCGCT CGGTGCTGGT GCAGGCGGGC ATTTTGTGCG TGGAGCTGCC CAAGGCCGTG
GACGAATGCG TGCGCGAGGC CTACCGCTCC ATCTGCAAGG AAGCGGGCGC CGAAGACGTG
CCCGTGGCCG TGCGTTCCTC TGCCGCCGGT GAAGACTCGC GCAAGAAGGC CTTCGCCGGG
TTGCAGGACA CCTACCTGAA CATCGTGGGC GAAAGCCGCG TGTCCGCCGC CTACCACTGG
GACTGCGCGT CGGCCTACAA CCTGCGTTCC ATGACCTACC GCCGCGAGGC GATCCTGGAC
GCGCAGGCCC GCGCCGAAGC CACCGGCGAC GAATCCATTG CCATCAAGGC CAAGCAGGAA
TGGGCCATCG AGAATACCTC GCTCTCGGTG TGCATCATGC GCATGATCAA CCCGGTCATT
TCGGGCACAG CCTTCAGCGC GGACACCGCC ACCGGCTGCC GGGGCACCGC CCGCAAGGAT
CTGGTGGGCA TGGACGCCAG CTACGGCCTG GGCGAGGCCG TGGTGGGCGG CATGGTCACC
CCCGACAAGT TCTACGTCTT CCAGCGTGAC GACGGGCCCG AGGTGGTCAT CCGCCAGATG
GGCTGCAAGG ACAAGAAGAT CGTCTACGAC GAGAAGGGCG GCACCAAGAA GGTTTCCGTG
CCCGAAATCG AGGCGTACCG CTGGTCGCTT TCGCTGGCCC AGGCCGAACA GGTGGCCAAG
GGCGTGCGCG CCATTAGCCG CGCCTACGGC GACATGATCA TGGACACCGA ATTCTGCATC
GACTCGGCCG ACCGGCTGTG GTTCGTGCAG GCCCGCCCCG AAACCCGCTG GAACGAAGAG
CTGGAAAAGC ACCCGCACAC CATCTTCATG CGCCGCCGCG AGGTGGACCC GAAGGCGGCC
ACCCAGGCCG AGGTGCTGCT GGAAGGCAAC GGCGCGTCGC GCGGGGCAGG GCAGGGCAGG
GTGAAGTTCC TGCGGTCCGC CCTGGAACTG AACAAGATCA ACAAGGGCGA CATCCTCGCC
GCCGACCGCA CCGACCCCGA CATGGTGCCC GGCATGCGCG TGGCCGCCGC CATCCTTGCC
GACGTGGGCG GCGACACCAG CCACGCCGCC ATCACCTCGC GCGAACTGGG CATCCCCGCC
GTCATCGGCA TCCAGCGCCT GGAAATCCTG CGCGCCCTGG ACGGCCAGGA AGTGACCGTG
GACGGCACCC GGGGCCGGGT GTACCGGGGC ATGCTGCCCC TGCGCGAAGT GGGCGGCGAA
ATGGACCTGT CCAAGCTGCC CCCCACCAAG ACCAAGGTGG GCCTGATTCT GGCCGACGTG
GGCCAGGCCA TGTTCCTTTC GCGCCTGCGC GAGGTGGAAG ACTTCGAGGT GGGCCTGCTG
CGCGCGGAAT TCATGCTGGG CAACATCGGC GTGCATCCGC AGGCGCTGGA AGCCTTCGAC
AGCGGCGAAC TGGAACACGC CGTGCACGCC AAGCTGCGCG AACTGGATTC CCGCCTGTCC
AAGATCCTGC GAGAGCAGCT GTCTGCCGGG CTCATCGCCA TCGACATGAA GCTGCGCGAG
TACGTGGGCC ACATCACCGG CCTTTCGGCG GAAATCGAGG CCCTGGCCTC GCGCGAGAAC
CTGCGCGGCA CCGAACAGGT GCTGGTCATG CACCGCAAGA TGCGCGAACT GGACCACAAG
CTGGACGAGC ACGTGGAACT GGCCACCCGC CGCATCGACA TCCTGAAGAC GTCCATCGAC
CTTGAAGACC ACGTGCGCGT GGTAATGGGC TACGATGACC AGCTGGCCAT GCTCAACGGC
ATCGACCCGG ACACGGTGAA GCGCCGCGCC GAGATCGAAG CCAACATCCG CGCCCAGGTG
GAACGCATCG AAGACATCCC CGCCGTGCAG GACGCGCTGG CCAAGATCGC CCGCCTGCGC
CACGAGGTGG GTCTGCGTAG CGGCCTGCAG AAGGAAATGG ACGACATGCG CGCCGTGCCG
GACAAGATCC GCGCCCTGAT CCGCTCGCGC GGGTTCCGCA CCGGCAAGGA GCACTACGTC
CAGACCCTGT CGCAGGGCCT GGCCCTGTTC GCCATGGCCT TCTACGGCAA GGACATCGTC
TACCGCACCA CCGACTTCAA GTCGAACGAG TACCGCAACC TGCTGGGCGG CAACCTGTTC
GAGCAGATGG AAGACAACCC CATGCTGGGC TTCCGCGGGG TGTCGCGCAA CCTGCACGAC
TGGGAAATCG AGGCCTTCAA GCTGGCGCGC GGCGTGTACG GCGGGTGCAA CCTGCAACTC
ATGCTGCCCT TCGTGCGCAC CCTGGAAGAA GCGCGCTCCA TGCGCCGCTA TCTGGAACAG
GTGCACAAGC TGAAGAGCGG CGTCGACGGG CTGAAGATGA TCCAGATGTC GGAAATCCCG
TCCAACGCCG TGCTGGCCAA GCAGTTCATC GAGGAATTCG ACGGCTTCTC CATCGGTTCC
AACGACATGA CCCAGATGGT GCTGGCCACC GACCGCGACA ACGCGCGTCT CGGCCACATC
TACGACGAGG AAGACCCTGC CGTGGTCTGG GCCATCCTGG TGACCATCTT CACCGGCCAG
AAGTGCGCCC GCAAGGTGGG CTTCTGCGGT CAGGGCGTGT CCAACAGCAA GATCCTGCGC
GGCCTGGTGG CCATCGCGGG CATCGTGTCC GCCTCGGTGG TGCCCGACAC CTACTACCAG
ACCAAACTGG ACATGGCCGA GGTGGAGGCC GAAAATATCC CCACCTCGGA ACTGGGCAAC
TGGCTGCGCA ACCAGCACCT GGCCAACCTG CGTGCGCTGC TGGAGGAAAA GGGCTACGGC
CACATCCTCA AGAAGTACAC CCAGGCCGAA GACCTGATGG ACTGGTACGA AGGCGAATTG
CGCCGCCTGC ACGAACTGCT GCGCGAAAGC CTGGAAACGC CCAAGGAAAA GTTCTACCGC
TCCGAGTTGG AACAGTTCCG GGCCACCTTC CACAAGCCGG TCATCTACGC CACCTGGGAC
TGGGCGGGCA CCGTGTCCGA CGCCCTGCAC CAGGCCGGTT TCGCCAGCTT CGAGGAACAG
GCCAAGGCCC TGGAGGCCCA GCGCGCCAAA AAGTGGTAG
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| Protein sequence | MGKTPVEKPA AKAAKAGAEI SELTKKLVLT GADIVRIGDD AELLVGGKNY NTAIISQVEG
IRAPEFRAIS SQAFHMLLDE TRVNASLVRA TVDKEYNRID WNDPEINKDS EFLQKFVRNL
AKEIRAQASA KPGETQIKLR TFVNNVVEGF ATSPEGIDQL RKRSVLVQAG ILCVELPKAV
DECVREAYRS ICKEAGAEDV PVAVRSSAAG EDSRKKAFAG LQDTYLNIVG ESRVSAAYHW
DCASAYNLRS MTYRREAILD AQARAEATGD ESIAIKAKQE WAIENTSLSV CIMRMINPVI
SGTAFSADTA TGCRGTARKD LVGMDASYGL GEAVVGGMVT PDKFYVFQRD DGPEVVIRQM
GCKDKKIVYD EKGGTKKVSV PEIEAYRWSL SLAQAEQVAK GVRAISRAYG DMIMDTEFCI
DSADRLWFVQ ARPETRWNEE LEKHPHTIFM RRREVDPKAA TQAEVLLEGN GASRGAGQGR
VKFLRSALEL NKINKGDILA ADRTDPDMVP GMRVAAAILA DVGGDTSHAA ITSRELGIPA
VIGIQRLEIL RALDGQEVTV DGTRGRVYRG MLPLREVGGE MDLSKLPPTK TKVGLILADV
GQAMFLSRLR EVEDFEVGLL RAEFMLGNIG VHPQALEAFD SGELEHAVHA KLRELDSRLS
KILREQLSAG LIAIDMKLRE YVGHITGLSA EIEALASREN LRGTEQVLVM HRKMRELDHK
LDEHVELATR RIDILKTSID LEDHVRVVMG YDDQLAMLNG IDPDTVKRRA EIEANIRAQV
ERIEDIPAVQ DALAKIARLR HEVGLRSGLQ KEMDDMRAVP DKIRALIRSR GFRTGKEHYV
QTLSQGLALF AMAFYGKDIV YRTTDFKSNE YRNLLGGNLF EQMEDNPMLG FRGVSRNLHD
WEIEAFKLAR GVYGGCNLQL MLPFVRTLEE ARSMRRYLEQ VHKLKSGVDG LKMIQMSEIP
SNAVLAKQFI EEFDGFSIGS NDMTQMVLAT DRDNARLGHI YDEEDPAVVW AILVTIFTGQ
KCARKVGFCG QGVSNSKILR GLVAIAGIVS ASVVPDTYYQ TKLDMAEVEA ENIPTSELGN
WLRNQHLANL RALLEEKGYG HILKKYTQAE DLMDWYEGEL RRLHELLRES LETPKEKFYR
SELEQFRATF HKPVIYATWD WAGTVSDALH QAGFASFEEQ AKALEAQRAK KW
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