Gene DvMF_0389 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvMF_0389 
Symbol 
ID7172275 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris str. 'Miyazaki F' 
KingdomBacteria 
Replicon accessionNC_011769 
Strand
Start bp457193 
End bp458038 
Gene Length846 bp 
Protein Length281 aa 
Translation table11 
GC content69% 
IMG OID643538888 
ProductBeta-lactamase 
Protein accessionYP_002434814 
Protein GI218885493 
COG category[V] Defense mechanisms 
COG ID[COG2602] Beta-lactamase class D 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones74 
Fosmid unclonability p-value0.384736 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGATGC AACGTGTTTC TCCCCTGGCG GCACTTGCCC TGCTGCTTGC CCTGTGCACG 
GCCCTGCCCG CCCCGGCCCG CGCCGCCGCC AGTTTTCTTG CGCGCGAGGG CGACGAGGTG
CTGGCCGCAA AGGGCGACCT GTCCACCCGC CGCTCGCCCT GCTCCACCTT CAAGGTCGCC
ATCAGCCTCA TGGGCTACGA CGCGGGCATC CTGATCGACG CAACGCACCC GGTGCGCCCC
TATGACGAAA GCCTGAACGT GGCCTACGAC ATGTGGAAGC AGCCGCACGA TCCCGTCATG
TGGATGCGCA ACAGCTGCGT GTGGTATTCG CAGGCCACCA CGCGCGAACT GGGCATGGAG
CGCTTCAGGG CCTACGTGGA CCGCTTCGGC TACGGCAACC GCGACATCTC TGGGCGGCGT
GGCCCGCTGG ATGCCATCGC CCCGGACGAC GGCCTGACCC GCTCGTGGCT GTCCGGCAGC
CTGGCCATCT CGCCCGAGGA AGAGGTGGAC TTCATCGGCA GGCTGGTGCG TTCCGAGCTG
CCGGTGTCGG CGCATGCGCA GGAAATGACC CGGCGCATCC TGTTCGTGCA GGACTTGCAG
GGCGGCTGGA AGCTGTACGG CAAGACCGGC AGCGGGGTGC GCCAACTGCC CGACGGCTCG
CGCGTCGAAG ACCGGCAGAT CGGCTGGTTC GTGGGCTGGG CGCAGCATGG GGATGGCCGT
ACAGTGCTGT TCGCCCACCT GCAAGAGGAC GAGGACGACA ACCCGGCCCC GGCTGGGCGC
AGGTCGCGCG ATGCGGCCAT CGTCAAGGTG CAGCGGCTGC TGGGCGTTGC CCCCGGCGAG
TGGTAG
 
Protein sequence
MRMQRVSPLA ALALLLALCT ALPAPARAAA SFLAREGDEV LAAKGDLSTR RSPCSTFKVA 
ISLMGYDAGI LIDATHPVRP YDESLNVAYD MWKQPHDPVM WMRNSCVWYS QATTRELGME
RFRAYVDRFG YGNRDISGRR GPLDAIAPDD GLTRSWLSGS LAISPEEEVD FIGRLVRSEL
PVSAHAQEMT RRILFVQDLQ GGWKLYGKTG SGVRQLPDGS RVEDRQIGWF VGWAQHGDGR
TVLFAHLQED EDDNPAPAGR RSRDAAIVKV QRLLGVAPGE W