Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DvMF_0389 |
Symbol | |
ID | 7172275 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
Kingdom | Bacteria |
Replicon accession | NC_011769 |
Strand | + |
Start bp | 457193 |
End bp | 458038 |
Gene Length | 846 bp |
Protein Length | 281 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 643538888 |
Product | Beta-lactamase |
Protein accession | YP_002434814 |
Protein GI | 218885493 |
COG category | [V] Defense mechanisms |
COG ID | [COG2602] Beta-lactamase class D |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 74 |
Fosmid unclonability p-value | 0.384736 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGGATGC AACGTGTTTC TCCCCTGGCG GCACTTGCCC TGCTGCTTGC CCTGTGCACG GCCCTGCCCG CCCCGGCCCG CGCCGCCGCC AGTTTTCTTG CGCGCGAGGG CGACGAGGTG CTGGCCGCAA AGGGCGACCT GTCCACCCGC CGCTCGCCCT GCTCCACCTT CAAGGTCGCC ATCAGCCTCA TGGGCTACGA CGCGGGCATC CTGATCGACG CAACGCACCC GGTGCGCCCC TATGACGAAA GCCTGAACGT GGCCTACGAC ATGTGGAAGC AGCCGCACGA TCCCGTCATG TGGATGCGCA ACAGCTGCGT GTGGTATTCG CAGGCCACCA CGCGCGAACT GGGCATGGAG CGCTTCAGGG CCTACGTGGA CCGCTTCGGC TACGGCAACC GCGACATCTC TGGGCGGCGT GGCCCGCTGG ATGCCATCGC CCCGGACGAC GGCCTGACCC GCTCGTGGCT GTCCGGCAGC CTGGCCATCT CGCCCGAGGA AGAGGTGGAC TTCATCGGCA GGCTGGTGCG TTCCGAGCTG CCGGTGTCGG CGCATGCGCA GGAAATGACC CGGCGCATCC TGTTCGTGCA GGACTTGCAG GGCGGCTGGA AGCTGTACGG CAAGACCGGC AGCGGGGTGC GCCAACTGCC CGACGGCTCG CGCGTCGAAG ACCGGCAGAT CGGCTGGTTC GTGGGCTGGG CGCAGCATGG GGATGGCCGT ACAGTGCTGT TCGCCCACCT GCAAGAGGAC GAGGACGACA ACCCGGCCCC GGCTGGGCGC AGGTCGCGCG ATGCGGCCAT CGTCAAGGTG CAGCGGCTGC TGGGCGTTGC CCCCGGCGAG TGGTAG
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Protein sequence | MRMQRVSPLA ALALLLALCT ALPAPARAAA SFLAREGDEV LAAKGDLSTR RSPCSTFKVA ISLMGYDAGI LIDATHPVRP YDESLNVAYD MWKQPHDPVM WMRNSCVWYS QATTRELGME RFRAYVDRFG YGNRDISGRR GPLDAIAPDD GLTRSWLSGS LAISPEEEVD FIGRLVRSEL PVSAHAQEMT RRILFVQDLQ GGWKLYGKTG SGVRQLPDGS RVEDRQIGWF VGWAQHGDGR TVLFAHLQED EDDNPAPAGR RSRDAAIVKV QRLLGVAPGE W
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