| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DvMF_0299 |
|---|
| Symbol | |
|---|
| ID | 7172181 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011769 |
|---|
| Strand | + |
|---|
| Start bp | 344389 |
|---|
| End bp | 345780 |
|---|
| Gene Length | 1392 bp |
|---|
| Protein Length | 463 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 643538795 |
|---|
| Product | glycosyl transferase family 9 |
|---|
| Protein accession | YP_002434724 |
|---|
| Protein GI | 218885403 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0859] ADP-heptose:LPS heptosyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 67 |
|---|
| Fosmid unclonability p-value | 0.155014 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCAAAC ACCTCGTCAT CCAACTGGCC CGCTTCGGCG ATCTCGTGCA GACCAAGCGT
CTGATACTGT CGTTGCTGAA CGGGGAGGGG GCTGACGGTG GCGATACGCA CGGCACGGGG
CAGGGACCGG GGCAGGGACC GGGGCATGCG GTTGCTCCCG CCCCCGAAGT ACATCCGTCA
GGGGGGCTTT CCTCAGAGGT GCATCTGCCC GAGGTGCATC TTGCGGTCGA CGCCTCGCTG
GTCGAACTGG CCCGGCTGGT CTACCCCGGC GTCACCGTGC ACGGCGTGCG CGCCCACGGC
GGTGTCCCGC AGGCGGACGT GCTGGCGCAC AACGCCCGCG CCTTCGCCGT CCTGGCGACG
GAACGCTTCG ATACCGTCTA CAACCTGAAC AATTCCGGGC TGAACATGGC CCTTGCCGCG
CTGTTCCCGC CCGATGCGGT GCGCGGCTAC CGCAGCCTGA ACGGCCAGCC CCTGCGCGAC
CGCTGGATGC GCATGGCCTT TCGCTGGGTG GCGCACCGCC GCCTGTCCCC CGTCAATCTC
GTGGACTTCT GGGCGGCGCT GGCCCCCCGG CCCATTGCCC CGGCGCGGGT AAACCCCATC
GCCCTGCGGG GCGGGCGGGG CATCGGCGTG GTGCTGGCCG GGCGCATGTC GCGCCGTTCG
CTGCCGCCCG ATGCGCTGGC TGCCTGCCTG CGCGCCGTGT ACGAGGGGCT GGGCGGCCCG
CGCGTGACCT TTTTCGGCAC CAGGGCCGAG CGTCCGTTGC TGCGCAAGGT GCTGGACCAT
CTGCCCGCGT CCGTGGCGGG GAACCACGAC GACCTCGTGG GCCGCACCGG CTGGGCGGAC
CTGGCCGACG CGCTTGCGGG GCTGGACACG CTGCTCACCC CCGATACCGG CACCATGCAC
CTTGCCGCGC ACCTTGGCGT GCCGGTGCAG GGTTTCTTTC TGTCCTCGGC GTGGTGCCAC
GAAACGGGCC CCTACGGCCC CGGCCACCGG GTGTGGCAGG CCACCCTGGA CTGCCTGCCC
TGCCTGGAGG CGCGGCCATG CCCCATCGGG GTGCAATGCC TGGATGCCTT CCGCTCGCGC
GAGTTCCTGT CCTTTCTCTC CGGCCGCCCC GGCGAACGCA ACCCGCCCGG CATGCTGGGC
ATGGTTTCCA CCCTCGACGA CGTGGGGTCC ACCTGGCTCA CCGTGTTCGG CGAAGACCCG
TCCGCGCCGC GCCGGGTGGA ACTGCGAGCG CTGGTGGGCG AATACCTGGG CCTGTTTACG
GGCGAGGAAC TGACGGACCA CGACCTGGCC CGCCTGCTGT ACCACGAGGC GGACTGGATG
CTGCCGGGCC CGGAAGGGGC GGCCTTTGCC GCGTTCGACC CGTTTGCGGA CCAGCCGCAG
CGCGGTGCAT GA
|
|---|
| Protein sequence | MAKHLVIQLA RFGDLVQTKR LILSLLNGEG ADGGDTHGTG QGPGQGPGHA VAPAPEVHPS
GGLSSEVHLP EVHLAVDASL VELARLVYPG VTVHGVRAHG GVPQADVLAH NARAFAVLAT
ERFDTVYNLN NSGLNMALAA LFPPDAVRGY RSLNGQPLRD RWMRMAFRWV AHRRLSPVNL
VDFWAALAPR PIAPARVNPI ALRGGRGIGV VLAGRMSRRS LPPDALAACL RAVYEGLGGP
RVTFFGTRAE RPLLRKVLDH LPASVAGNHD DLVGRTGWAD LADALAGLDT LLTPDTGTMH
LAAHLGVPVQ GFFLSSAWCH ETGPYGPGHR VWQATLDCLP CLEARPCPIG VQCLDAFRSR
EFLSFLSGRP GERNPPGMLG MVSTLDDVGS TWLTVFGEDP SAPRRVELRA LVGEYLGLFT
GEELTDHDLA RLLYHEADWM LPGPEGAAFA AFDPFADQPQ RGA
|
|---|
| |